Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC245100.2-201ENST00000454544 1679 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AL445466.1-201ENST00000448432 357 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 SDC4P-201ENST00000453285 601 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC239798.3-201ENST00000454459 408 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 LDHBP2-201ENST00000456969 1005 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC019084.1-201ENST00000457337 432 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC105918.1-201ENST00000474399 838 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 RPL23AP73-201ENST00000492507 471 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 RN7SKP67-201ENST00000515905 235 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC008147.3-201ENST00000548666 354 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AL049779.3-201ENST00000557141 606 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 OR1AB1P-201ENST00000585564 761 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC012254.3-201ENST00000591183 2117 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC068768.2-201ENST00000602352 343 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 RPAP2P1-201ENST00000603626 1168 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC026979.4-201ENST00000606555 645 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AL159169.2-201ENST00000610061 1269 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC022960.3-201ENST00000619794 441 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AL591926.1-201ENST00000620542 217 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC023510.2-201ENST00000622162 746 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AL596275.2-207ENST00000641188 675 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC093225.1-201ENST00000506867 1408 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AC104966.1-201ENST00000467010 1464 ntBASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP3Q96JB5 AP002512.4-202ENST00000641599 4530 ntBASIC6.71□□□□□ -1.33
CDK5RAP3Q96JB5 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CDK5RAP3Q96JB5 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CDK5RAP3Q96JB5 HSPA8P19-201ENST00000505359 1517 ntBASIC6.71□□□□□ -1.33
CDK5RAP3Q96JB5 Z95114.1-201ENST00000624264 14574 ntBASIC6.71□□□□□ -1.33
CDK5RAP3Q96JB5 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CDK5RAP3Q96JB5 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 CAP1P2-201ENST00000417455 1409 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 RBPJP7-201ENST00000442803 1447 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 RBPJP5-201ENST00000449433 1447 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 RNU6-609P-201ENST00000365459 107 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 RSL24D1P1-201ENST00000404972 493 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC099677.3-201ENST00000427081 395 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 PNKDP1-201ENST00000435914 430 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 Z99127.2-201ENST00000441426 334 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC068228.1-201ENST00000461723 211 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC098583.1-201ENST00000480875 255 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 OR9N1P-202ENST00000494289 481 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 RN7SL649P-201ENST00000496974 275 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC008629.2-201ENST00000503783 483 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 ASNSP4-201ENST00000511103 447 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 RN7SKP238-201ENST00000516483 249 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC011853.1-201ENST00000518911 454 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms