Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HPS3Q969F9 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.66□□□□□ -1.34
HPS3Q969F9 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HPS3Q969F9 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HPS3Q969F9 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.66□□□□□ -1.34
HPS3Q969F9 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.65□□□□□ -1.34
HPS3Q969F9 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.65□□□□□ -1.34
HPS3Q969F9 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
HPS3Q969F9 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HPS3Q969F9 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
HPS3Q969F9 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HPS3Q969F9 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.65□□□□□ -1.34
HPS3Q969F9 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HPS3Q969F9 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.65□□□□□ -1.34
HPS3Q969F9 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HPS3Q969F9 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
HPS3Q969F9 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HPS3Q969F9 RNA5SP514-201ENST00000363717 111 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 SNORA51.9-201ENST00000384295 124 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 SNRPEP6-201ENST00000407465 277 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HPS3Q969F9 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.65□□□□□ -1.34
HPS3Q969F9 RPS7P8-201ENST00000418311 581 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AC092651.1-201ENST00000426110 312 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.65□□□□□ -1.34
HPS3Q969F9 BX679664.2-201ENST00000439282 283 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HPS3Q969F9 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.65□□□□□ -1.34
HPS3Q969F9 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.65□□□□□ -1.34
HPS3Q969F9 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 AL358876.1-201ENST00000453364 1075 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.65□□□□□ -1.34
HPS3Q969F9 PFN1P8-201ENST00000497012 543 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 AC093801.2-201ENST00000503966 1050 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
HPS3Q969F9 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.65□□□□□ -1.34
HPS3Q969F9 RN7SKP67-201ENST00000515905 235 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.65□□□□□ -1.34
HPS3Q969F9 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.65□□□□□ -1.34
HPS3Q969F9 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.65□□□□□ -1.34
HPS3Q969F9 C1DP5-201ENST00000525775 383 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AP001804.2-201ENST00000533932 910 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.65□□□□□ -1.34
HPS3Q969F9 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HPS3Q969F9 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.65□□□□□ -1.34
HPS3Q969F9 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HPS3Q969F9 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.65□□□□□ -1.34
HPS3Q969F9 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AL158050.2-201ENST00000605336 568 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 AC004477.3-201ENST00000614061 590 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AP003476.1-201ENST00000623984 516 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.65□□□□□ -1.34
HPS3Q969F9 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.65□□□□□ -1.34
HPS3Q969F9 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
HPS3Q969F9 CASC19-274ENST00000642018 970 ntBASIC6.65□□□□□ -1.34
HPS3Q969F9 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HPS3Q969F9 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HPS3Q969F9 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
HPS3Q969F9 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HPS3Q969F9 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.65□□□□□ -1.35
HPS3Q969F9 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HPS3Q969F9 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HPS3Q969F9 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.65□□□□□ -1.35
HPS3Q969F9 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
HPS3Q969F9 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
HPS3Q969F9 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HPS3Q969F9 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.65□□□□□ -1.35
HPS3Q969F9 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.64□□□□□ -1.35
HPS3Q969F9 GTF2IP4-201ENST00000453092 2054 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
HPS3Q969F9 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.64□□□□□ -1.35
HPS3Q969F9 NMD3P2-201ENST00000421815 761 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AL365220.1-201ENST00000432923 399 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 PNKDP1-201ENST00000435914 430 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms