Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MAPK10-263ENST00000641052 4307 ntBASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 AL162456.1-201ENST00000634535 2006 ntBASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 RNU1-146P-201ENST00000364015 165 ntBASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 OR4K12P-201ENST00000406538 961 ntBASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 ATP5LP5-201ENST00000483050 299 ntBASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 AC095055.1-201ENST00000603472 1113 ntBASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 AP000346.3-201ENST00000622821 210 ntBASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
CFAP43Q8NDM7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 AC073648.4-201ENST00000442655 781 ntBASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 HMGB1P40-201ENST00000525121 540 ntBASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 AC005084.1-201ENST00000605160 304 ntBASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CFAP43Q8NDM7 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 RNGTTP1-201ENST00000420965 728 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC016712.1-201ENST00000431088 378 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC002075.1-201ENST00000457396 676 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC092490.3-201ENST00000545370 572 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC060780.2-201ENST00000589047 198 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC010329.1-201ENST00000593903 8328 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 SNORA70.9-201ENST00000384370 135 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 NDUFAF4P2-201ENST00000445374 520 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 HNRNPDLP2-201ENST00000455248 751 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 RN7SKP147-201ENST00000517154 244 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 OR11H3P-201ENST00000554547 982 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC135068.5-201ENST00000624197 983 ntBASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.56□□□□□ -1.04
CFAP43Q8NDM7 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CFAP43Q8NDM7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms