Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AL357752.1-201ENST00000412817 349 ntBASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AC073610.1-201ENST00000489971 396 ntBASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AL035690.1-201ENST00000490892 383 ntBASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 RNA5SP373-201ENST00000517271 95 ntBASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AC139365.2-201ENST00000517972 253 ntBASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 TVP23CP2-201ENST00000571473 623 ntBASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AC020910.2-201ENST00000603635 610 ntBASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AP002364.1-201ENST00000623330 3386 ntBASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC168Q8NDH2 AC091046.3-201ENST00000631455 1574 ntBASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 TRGV7-201ENST00000427089 353 ntBASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 CNOT7P1-201ENST00000429006 852 ntBASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 AC023141.8-201ENST00000442554 208 ntBASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 GAPDHP25-201ENST00000447061 1001 ntBASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 VDAC2P4-201ENST00000452925 711 ntBASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 OR4A40P-201ENST00000533878 948 ntBASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 PARP1P2-201ENST00000556806 195 ntBASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 AC106730.2-201ENST00000566641 540 ntBASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC168Q8NDH2 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 NUTF2P7-201ENST00000453086 375 ntBASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC103987.1-201ENST00000473394 348 ntBASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 RNU1-32P-201ENST00000363937 159 ntBASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 RNU11-6P-201ENST00000391127 133 ntBASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC093655.2-201ENST00000425735 631 ntBASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC004975.1-201ENST00000428733 208 ntBASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC044797.1-201ENST00000445744 679 ntBASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 CCDC11P1-201ENST00000503137 1162 ntBASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 MIR4311-201ENST00000580794 100 ntBASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 AC135068.12-201ENST00000637370 931 ntBASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC168Q8NDH2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms