Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MTND4P33-201ENST00000556706 766 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC007346.2-201ENST00000564816 892 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC145350.1-201ENST00000567426 208 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 MRPS21P9-201ENST00000571150 257 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 PCNAP1-202ENST00000595299 752 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 VN1R78P-201ENST00000597393 564 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC010333.3-201ENST00000615100 402 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 MIR6085-201ENST00000618314 110 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC010975.3-201ENST00000618727 978 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC022079.1-201ENST00000621546 602 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 ZNF663P-202ENST00000641770 1131 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AL121950.1-201ENST00000624993 2077 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 MAPK10-270ENST00000641102 3538 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 GTF2H2B-203ENST00000508065 1432 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 AC127070.3-201ENST00000503695 3263 ntBASIC6.67□□□□□ -1.34
SYNPOQ8N3V7 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 MAPK10-344ENST00000641718 3746 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 CCT8P1-201ENST00000413611 1657 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 COX6B1P3-201ENST00000312310 260 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 RNA5SP65-201ENST00000363166 119 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 RPL9P21-201ENST00000392269 505 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 KRR1P1-201ENST00000419430 803 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 OSTCP4-201ENST00000424397 449 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 RPS29P14-201ENST00000431518 171 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC073052.1-201ENST00000440417 714 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 HMGB3P6-201ENST00000444896 598 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AL589880.1-201ENST00000448271 287 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC093166.2-201ENST00000455969 1017 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC068228.1-201ENST00000461723 211 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 RPL23AP37-201ENST00000479658 549 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC119751.1-201ENST00000513357 765 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 RNA5SP418-201ENST00000515951 117 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 RN7SKP253-201ENST00000516424 309 ntBASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNPOQ8N3V7 AC027104.1-201ENST00000563702 681 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms