Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 AC109780.1-201ENST00000451768 1344 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 RN7SKP278-201ENST00000410504 342 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 RN7SKP17-201ENST00000411242 351 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 AL451063.1-201ENST00000450164 1133 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 AC104634.1-201ENST00000452720 462 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 RPS21P4-201ENST00000487122 248 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 AC008953.1-201ENST00000497334 318 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 ARL6IP1P3-201ENST00000524544 560 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 OR8G3P-201ENST00000533406 921 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 AL049779.2-201ENST00000553847 315 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 MIR1269B-201ENST00000580405 75 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 AC108738.1-201ENST00000603703 237 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 WBP1LP8-201ENST00000617401 327 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 SAMMSON-209ENST00000641222 1100 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 AL731532.1-201ENST00000623972 4236 ntBASIC8.5□□□□□ -1.05
VPS8Q8N3P4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
VPS8Q8N3P4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 U3.7-201ENST00000363668 216 ntBASIC8.49□□□□□ -1.05
VPS8Q8N3P4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AC058823.1-201ENST00000485315 474 ntBASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AC127381.1-201ENST00000555979 939 ntBASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AC005341.1-201ENST00000571086 708 ntBASIC8.49□□□□□ -1.05
VPS8Q8N3P4 NPM1P45-201ENST00000583151 559 ntBASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 TAS2R6P-201ENST00000605022 826 ntBASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AL356608.1-201ENST00000610034 820 ntBASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AC244107.2-201ENST00000611773 76 ntBASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AC144833.1-201ENST00000567953 4089 ntBASIC8.49□□□□□ -1.05
VPS8Q8N3P4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
VPS8Q8N3P4 AC004076.2-201ENST00000620532 3323 ntBASIC8.48□□□□□ -1.05
VPS8Q8N3P4 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 SLC35E1P1-201ENST00000419313 864 ntBASIC8.48□□□□□ -1.05
VPS8Q8N3P4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 NDUFB4P8-201ENST00000435351 367 ntBASIC8.48□□□□□ -1.05
VPS8Q8N3P4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 AC008638.1-201ENST00000506035 866 ntBASIC8.48□□□□□ -1.05
VPS8Q8N3P4 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 AC136777.2-201ENST00000522979 358 ntBASIC8.48□□□□□ -1.05
VPS8Q8N3P4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 AC126915.2-201ENST00000610957 190 ntBASIC8.48□□□□□ -1.05
VPS8Q8N3P4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 AC073869.8-201ENST00000641806 335 ntBASIC8.48□□□□□ -1.05
VPS8Q8N3P4 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 EPS15P1-202ENST00000459691 2071 ntBASIC8.48□□□□□ -1.05
VPS8Q8N3P4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.48□□□□□ -1.05
VPS8Q8N3P4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS8Q8N3P4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.47□□□□□ -1.05
VPS8Q8N3P4 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
VPS8Q8N3P4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
VPS8Q8N3P4 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
VPS8Q8N3P4 AP000534.2-201ENST00000412729 568 ntBASIC8.47□□□□□ -1.05
VPS8Q8N3P4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms