Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL121594.2-201ENST00000541658 472 ntBASIC3.28□□□□□ -1.88
HSPG2P98160 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.28□□□□□ -1.88
HSPG2P98160 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.28□□□□□ -1.88
HSPG2P98160 AC007224.1-201ENST00000564410 144 ntBASIC3.28□□□□□ -1.88
HSPG2P98160 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.28□□□□□ -1.88
HSPG2P98160 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HSPG2P98160 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC3.28□□□□□ -1.88
HSPG2P98160 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC3.28□□□□□ -1.88
HSPG2P98160 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HSPG2P98160 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HSPG2P98160 AC005225.5-201ENST00000623547 2225 ntBASIC3.28□□□□□ -1.88
HSPG2P98160 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HSPG2P98160 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HSPG2P98160 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HSPG2P98160 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC3.28□□□□□ -1.89
HSPG2P98160 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
HSPG2P98160 AC006600.2-201ENST00000624834 2506 ntBASIC3.28□□□□□ -1.89
HSPG2P98160 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.28□□□□□ -1.89
HSPG2P98160 AL365220.1-201ENST00000432923 399 ntBASIC3.28□□□□□ -1.89
HSPG2P98160 FHP1-201ENST00000442741 703 ntBASIC3.28□□□□□ -1.89
HSPG2P98160 AC010618.1-201ENST00000469924 477 ntBASIC3.28□□□□□ -1.89
HSPG2P98160 RNA5SP143-201ENST00000516936 115 ntBASIC3.28□□□□□ -1.89
HSPG2P98160 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC3.28□□□□□ -1.89
HSPG2P98160 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.28□□□□□ -1.89
HSPG2P98160 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.28□□□□□ -1.89
HSPG2P98160 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
HSPG2P98160 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC3.27□□□□□ -1.89
HSPG2P98160 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 TEK-204ENST00000519097 3836 ntTSL 2 BASIC3.27□□□□□ -1.89
HSPG2P98160 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC3.27□□□□□ -1.89
HSPG2P98160 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HSPG2P98160 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
HSPG2P98160 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 TMA16P2-201ENST00000413187 601 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 RPL12P43-201ENST00000420608 499 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.27□□□□□ -1.89
HSPG2P98160 snoU13.1-201ENST00000459157 104 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 SNORA67.7-201ENST00000516664 135 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 DHFRP1-201ENST00000579682 559 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.27□□□□□ -1.89
HSPG2P98160 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.27□□□□□ -1.89
HSPG2P98160 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC3.27□□□□□ -1.89
HSPG2P98160 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC3.27□□□□□ -1.89
HSPG2P98160 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC3.27□□□□□ -1.89
HSPG2P98160 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HSPG2P98160 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HSPG2P98160 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HSPG2P98160 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 RNA5SP447-201ENST00000363749 119 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HSPG2P98160 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 AL732292.1-201ENST00000426692 226 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.27□□□□□ -1.89
HSPG2P98160 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.27□□□□□ -1.89
HSPG2P98160 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.27□□□□□ -1.89
HSPG2P98160 SCARNA22-201ENST00000503991 125 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC3.27□□□□□ -1.89
HSPG2P98160 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 AC006427.1-201ENST00000514359 712 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 CYP4F27P-201ENST00000514557 494 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 MED28P5-201ENST00000528254 438 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.27□□□□□ -1.89
HSPG2P98160 AC005224.3-201ENST00000584683 2140 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.27□□□□□ -1.89
HSPG2P98160 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.27□□□□□ -1.89
HSPG2P98160 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC3.27□□□□□ -1.89
HSPG2P98160 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 LARS-201ENST00000274562 2213 ntTSL 2 BASIC3.27□□□□□ -1.89
HSPG2P98160 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.27□□□□□ -1.89
HSPG2P98160 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC3.27□□□□□ -1.89
HSPG2P98160 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 OR6C69P-201ENST00000394268 893 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.27□□□□□ -1.89
HSPG2P98160 AC006967.1-201ENST00000467608 589 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.27□□□□□ -1.89
HSPG2P98160 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.27□□□□□ -1.89
HSPG2P98160 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.27□□□□□ -1.89
HSPG2P98160 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.27□□□□□ -1.89
HSPG2P98160 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms