Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.69□□□□□ -1.5
RAE1P78406 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.69□□□□□ -1.5
RAE1P78406 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAE1P78406 RNA5SP211-201ENST00000365516 117 ntBASIC5.69□□□□□ -1.5
RAE1P78406 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
RAE1P78406 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.69□□□□□ -1.5
RAE1P78406 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.69□□□□□ -1.5
RAE1P78406 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.69□□□□□ -1.5
RAE1P78406 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAE1P78406 RPS12P17-201ENST00000438591 377 ntBASIC5.69□□□□□ -1.5
RAE1P78406 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.69□□□□□ -1.5
RAE1P78406 AC104164.1-201ENST00000460282 590 ntBASIC5.69□□□□□ -1.5
RAE1P78406 AC104164.3-201ENST00000467363 1258 ntBASIC5.69□□□□□ -1.5
RAE1P78406 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.69□□□□□ -1.5
RAE1P78406 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.69□□□□□ -1.5
RAE1P78406 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.69□□□□□ -1.5
RAE1P78406 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.69□□□□□ -1.5
RAE1P78406 MAST4-IT1-201ENST00000514241 658 ntBASIC5.69□□□□□ -1.5
RAE1P78406 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.69□□□□□ -1.5
RAE1P78406 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.69□□□□□ -1.5
RAE1P78406 OR5D2P-201ENST00000524390 911 ntBASIC5.69□□□□□ -1.5
RAE1P78406 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 AP003033.2-201ENST00000528901 805 ntBASIC5.69□□□□□ -1.5
RAE1P78406 OR4A41P-201ENST00000533053 928 ntBASIC5.69□□□□□ -1.5
RAE1P78406 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.69□□□□□ -1.5
RAE1P78406 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.69□□□□□ -1.5
RAE1P78406 AC025918.2-201ENST00000558683 763 ntBASIC5.69□□□□□ -1.5
RAE1P78406 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 AC090666.1-201ENST00000578241 445 ntBASIC5.69□□□□□ -1.5
RAE1P78406 AL357094.1-201ENST00000603845 844 ntBASIC5.69□□□□□ -1.5
RAE1P78406 AC112220.2-201ENST00000605513 533 ntBASIC5.69□□□□□ -1.5
RAE1P78406 AC112503.1-201ENST00000608436 391 ntBASIC5.69□□□□□ -1.5
RAE1P78406 AC021851.1-201ENST00000608537 1082 ntBASIC5.69□□□□□ -1.5
RAE1P78406 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 MIR6721-201ENST00000617181 87 ntBASIC5.69□□□□□ -1.5
RAE1P78406 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 AC073488.3-201ENST00000631611 778 ntBASIC5.69□□□□□ -1.5
RAE1P78406 AC111152.1-202ENST00000635848 339 ntBASIC5.69□□□□□ -1.5
RAE1P78406 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
RAE1P78406 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.69□□□□□ -1.5
RAE1P78406 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.69□□□□□ -1.5
RAE1P78406 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAE1P78406 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 AC007382.1-201ENST00000624376 2618 ntBASIC5.68□□□□□ -1.5
RAE1P78406 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RAE1P78406 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.68□□□□□ -1.5
RAE1P78406 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.68□□□□□ -1.5
RAE1P78406 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.68□□□□□ -1.5
RAE1P78406 ZNF658B-201ENST00000602828 3408 ntBASIC5.68□□□□□ -1.5
RAE1P78406 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
RAE1P78406 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RAE1P78406 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 RNFT1P3-201ENST00000340898 1052 ntBASIC5.68□□□□□ -1.5
RAE1P78406 RN7SKP184-201ENST00000362348 333 ntBASIC5.68□□□□□ -1.5
RAE1P78406 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 RPL10P10-201ENST00000403509 664 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AL096711.1-201ENST00000404780 554 ntBASIC5.68□□□□□ -1.5
RAE1P78406 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 RPL35AP3-201ENST00000414680 288 ntBASIC5.68□□□□□ -1.5
RAE1P78406 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.68□□□□□ -1.5
RAE1P78406 VN1R42P-201ENST00000424651 344 ntBASIC5.68□□□□□ -1.5
RAE1P78406 MTCO2P23-201ENST00000425216 680 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.68□□□□□ -1.5
RAE1P78406 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 AC096632.2-201ENST00000438139 1239 ntBASIC5.68□□□□□ -1.5
RAE1P78406 MTND1P26-201ENST00000440488 538 ntBASIC5.68□□□□□ -1.5
RAE1P78406 TRIM60P16-201ENST00000444048 694 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.68□□□□□ -1.5
RAE1P78406 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.68□□□□□ -1.5
RAE1P78406 snoU13.29-201ENST00000459370 104 ntBASIC5.68□□□□□ -1.5
RAE1P78406 RPL38P3-201ENST00000484463 213 ntBASIC5.68□□□□□ -1.5
RAE1P78406 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 AC098862.1-201ENST00000504991 413 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC113367.2-201ENST00000505749 160 ntBASIC5.68□□□□□ -1.5
RAE1P78406 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.68□□□□□ -1.5
RAE1P78406 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.68□□□□□ -1.5
RAE1P78406 AC108103.1-201ENST00000511286 446 ntBASIC5.68□□□□□ -1.5
RAE1P78406 snoU109.5-201ENST00000516231 132 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms