Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SKP1P63208 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SKP1P63208 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.44□□□□□ -1.54
SKP1P63208 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.44□□□□□ -1.54
SKP1P63208 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SKP1P63208 AC005005.4-201ENST00000623789 16698 ntBASIC5.44□□□□□ -1.54
SKP1P63208 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SKP1P63208 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SKP1P63208 MUC2-202ENST00000613187 4845 ntBASIC5.44□□□□□ -1.54
SKP1P63208 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SKP1P63208 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SKP1P63208 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SKP1P63208 AL050305.1-201ENST00000399993 1230 ntBASIC5.44□□□□□ -1.54
SKP1P63208 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SKP1P63208 AL357752.1-201ENST00000412817 349 ntBASIC5.44□□□□□ -1.54
SKP1P63208 AC113412.1-201ENST00000425840 504 ntBASIC5.44□□□□□ -1.54
SKP1P63208 AC021876.1-201ENST00000425959 359 ntBASIC5.44□□□□□ -1.54
SKP1P63208 BX323845.3-201ENST00000428215 527 ntBASIC5.44□□□□□ -1.54
SKP1P63208 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.44□□□□□ -1.54
SKP1P63208 AC090602.1-201ENST00000469695 252 ntBASIC5.44□□□□□ -1.54
SKP1P63208 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SKP1P63208 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.44□□□□□ -1.54
SKP1P63208 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SKP1P63208 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.44□□□□□ -1.54
SKP1P63208 UGT2A3P7-201ENST00000510485 734 ntBASIC5.44□□□□□ -1.54
SKP1P63208 RNU6-615P-201ENST00000516065 106 ntBASIC5.44□□□□□ -1.54
SKP1P63208 IGKV2-4-201ENST00000523070 340 ntBASIC5.44□□□□□ -1.54
SKP1P63208 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.44□□□□□ -1.54
SKP1P63208 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SKP1P63208 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.44□□□□□ -1.54
SKP1P63208 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.44□□□□□ -1.54
SKP1P63208 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.44□□□□□ -1.54
SKP1P63208 AC008521.2-201ENST00000591021 259 ntBASIC5.44□□□□□ -1.54
SKP1P63208 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
SKP1P63208 HIRAP1-201ENST00000605318 787 ntBASIC5.44□□□□□ -1.54
SKP1P63208 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.44□□□□□ -1.54
SKP1P63208 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.44□□□□□ -1.54
SKP1P63208 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SKP1P63208 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SKP1P63208 CDC27P2-201ENST00000425026 1922 ntBASIC5.44□□□□□ -1.54
SKP1P63208 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SKP1P63208 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SKP1P63208 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SKP1P63208 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SKP1P63208 AC010266.2-201ENST00000564741 3255 ntBASIC5.43□□□□□ -1.54
SKP1P63208 AC011503.2-201ENST00000594230 1500 ntBASIC5.43□□□□□ -1.54
SKP1P63208 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SKP1P63208 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.43□□□□□ -1.54
SKP1P63208 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 MFSD8-219ENST00000641228 2559 ntBASIC5.43□□□□□ -1.54
SKP1P63208 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.43□□□□□ -1.54
SKP1P63208 RN7SKP15-201ENST00000364742 309 ntBASIC5.43□□□□□ -1.54
SKP1P63208 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 RNA5SP178-201ENST00000410380 128 ntBASIC5.43□□□□□ -1.54
SKP1P63208 RN7SKP279-201ENST00000411383 298 ntBASIC5.43□□□□□ -1.54
SKP1P63208 METTL15P3-201ENST00000415522 1221 ntBASIC5.43□□□□□ -1.54
SKP1P63208 BX119321.1-201ENST00000428912 797 ntBASIC5.43□□□□□ -1.54
SKP1P63208 RPS29P14-201ENST00000431518 171 ntBASIC5.43□□□□□ -1.54
SKP1P63208 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.43□□□□□ -1.54
SKP1P63208 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.43□□□□□ -1.54
SKP1P63208 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.43□□□□□ -1.54
SKP1P63208 AC144530.1-201ENST00000452862 555 ntBASIC5.43□□□□□ -1.54
SKP1P63208 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.43□□□□□ -1.54
SKP1P63208 SNORD46.2-201ENST00000516021 102 ntBASIC5.43□□□□□ -1.54
SKP1P63208 TRIM51DP-201ENST00000529746 596 ntBASIC5.43□□□□□ -1.54
SKP1P63208 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SKP1P63208 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.43□□□□□ -1.54
SKP1P63208 AC015802.2-201ENST00000589690 189 ntBASIC5.43□□□□□ -1.54
SKP1P63208 AC002069.2-201ENST00000603580 883 ntBASIC5.43□□□□□ -1.54
SKP1P63208 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.43□□□□□ -1.54
SKP1P63208 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.43□□□□□ -1.54
SKP1P63208 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 AC022919.1-201ENST00000624979 626 ntBASIC5.43□□□□□ -1.54
SKP1P63208 MIR193BHG-214ENST00000641765 509 ntBASIC5.43□□□□□ -1.54
SKP1P63208 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.43□□□□□ -1.54
SKP1P63208 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
SKP1P63208 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SKP1P63208 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SKP1P63208 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SKP1P63208 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
SKP1P63208 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.42□□□□□ -1.54
SKP1P63208 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
SKP1P63208 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SKP1P63208 AC008079.2-201ENST00000623543 20396 ntBASIC5.42□□□□□ -1.54
SKP1P63208 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.42□□□□□ -1.54
SKP1P63208 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.42□□□□□ -1.54
SKP1P63208 NAMPTP1-201ENST00000440465 2514 ntBASIC5.42□□□□□ -1.54
SKP1P63208 OR13C1P-202ENST00000641378 2919 ntBASIC5.42□□□□□ -1.54
SKP1P63208 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SKP1P63208 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms