Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH6P55285 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CDH6P55285 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CDH6P55285 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH6P55285 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
CDH6P55285 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH6P55285 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH6P55285 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH6P55285 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH6P55285 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH6P55285 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CDH6P55285 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 SRRM1P3-201ENST00000426911 2678 ntBASIC5.81□□□□□ -1.48
CDH6P55285 RNA5SP394-201ENST00000364216 119 ntBASIC5.81□□□□□ -1.48
CDH6P55285 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH6P55285 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
CDH6P55285 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH6P55285 AL009179.1-201ENST00000406085 265 ntBASIC5.81□□□□□ -1.48
CDH6P55285 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.81□□□□□ -1.48
CDH6P55285 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH6P55285 RPS3P2-201ENST00000421346 701 ntBASIC5.81□□□□□ -1.48
CDH6P55285 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH6P55285 KCTD9P1-201ENST00000430462 1167 ntBASIC5.81□□□□□ -1.48
CDH6P55285 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH6P55285 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH6P55285 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH6P55285 RN7SL197P-201ENST00000466981 299 ntBASIC5.81□□□□□ -1.48
CDH6P55285 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH6P55285 RNU6-615P-201ENST00000516065 106 ntBASIC5.81□□□□□ -1.48
CDH6P55285 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH6P55285 OR5AM1P-201ENST00000532136 1032 ntBASIC5.81□□□□□ -1.48
CDH6P55285 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH6P55285 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH6P55285 IGBP1P1-201ENST00000554337 1009 ntBASIC5.81□□□□□ -1.48
CDH6P55285 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH6P55285 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH6P55285 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH6P55285 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH6P55285 AC100767.2-201ENST00000604840 693 ntBASIC5.81□□□□□ -1.48
CDH6P55285 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH6P55285 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH6P55285 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CDH6P55285 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH6P55285 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
CDH6P55285 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 MT-RNR2-201ENST00000387347 1559 ntBASIC5.8□□□□□ -1.48
CDH6P55285 AC007938.2-201ENST00000604666 2634 ntBASIC5.8□□□□□ -1.48
CDH6P55285 AC125336.1-201ENST00000508893 2827 ntBASIC5.8□□□□□ -1.48
CDH6P55285 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH6P55285 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 ABCC13-202ENST00000463099 3842 ntBASIC5.8□□□□□ -1.48
CDH6P55285 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH6P55285 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH6P55285 U3.28-201ENST00000391249 210 ntBASIC5.8□□□□□ -1.48
CDH6P55285 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 SNORA11.5-201ENST00000408163 128 ntBASIC5.8□□□□□ -1.48
CDH6P55285 MIR1282-201ENST00000408865 101 ntBASIC5.8□□□□□ -1.48
CDH6P55285 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH6P55285 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH6P55285 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH6P55285 AC023271.1-201ENST00000445936 1090 ntBASIC5.8□□□□□ -1.48
CDH6P55285 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 UBFD1P1-201ENST00000473259 814 ntBASIC5.8□□□□□ -1.48
CDH6P55285 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH6P55285 IGKV2-4-201ENST00000523070 340 ntBASIC5.8□□□□□ -1.48
CDH6P55285 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH6P55285 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
CDH6P55285 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH6P55285 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH6P55285 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH6P55285 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH6P55285 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 AC140134.1-201ENST00000511830 3544 ntBASIC5.8□□□□□ -1.48
CDH6P55285 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH6P55285 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 AC091305.2-201ENST00000624049 1576 ntBASIC5.8□□□□□ -1.48
CDH6P55285 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH6P55285 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH6P55285 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH6P55285 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms