Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RPSAP73-201ENST00000614820 330 ntBASIC6.24□□□□□ -1.41
VCPP55072 AC007204.2-201ENST00000615022 616 ntBASIC6.24□□□□□ -1.41
VCPP55072 AC090510.2-201ENST00000617465 629 ntBASIC6.24□□□□□ -1.41
VCPP55072 AL731566.2-201ENST00000618971 317 ntBASIC6.24□□□□□ -1.41
VCPP55072 AC073342.3-201ENST00000624211 193 ntBASIC6.24□□□□□ -1.41
VCPP55072 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
VCPP55072 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.24□□□□□ -1.41
VCPP55072 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VCPP55072 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VCPP55072 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.24□□□□□ -1.41
VCPP55072 AL161756.3-201ENST00000641216 2071 ntBASIC6.24□□□□□ -1.41
VCPP55072 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VCPP55072 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
VCPP55072 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VCPP55072 KYNUP3-201ENST00000574386 1341 ntBASIC6.24□□□□□ -1.41
VCPP55072 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VCPP55072 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
VCPP55072 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
VCPP55072 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
VCPP55072 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.23□□□□□ -1.41
VCPP55072 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 AC140134.1-201ENST00000511830 3544 ntBASIC6.23□□□□□ -1.41
VCPP55072 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.23□□□□□ -1.41
VCPP55072 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.23□□□□□ -1.41
VCPP55072 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.23□□□□□ -1.41
VCPP55072 RN7SKP124-201ENST00000364730 341 ntBASIC6.23□□□□□ -1.41
VCPP55072 RN7SKP186-201ENST00000365371 303 ntBASIC6.23□□□□□ -1.41
VCPP55072 HMGB1P20-201ENST00000402555 677 ntBASIC6.23□□□□□ -1.41
VCPP55072 MYL6P5-201ENST00000412707 459 ntBASIC6.23□□□□□ -1.41
VCPP55072 AC127526.2-201ENST00000426436 775 ntBASIC6.23□□□□□ -1.41
VCPP55072 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.23□□□□□ -1.41
VCPP55072 AC013410.1-201ENST00000436223 1232 ntBASIC6.23□□□□□ -1.41
VCPP55072 KRT8P51-201ENST00000438938 274 ntBASIC6.23□□□□□ -1.41
VCPP55072 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.23□□□□□ -1.41
VCPP55072 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.23□□□□□ -1.41
VCPP55072 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.23□□□□□ -1.41
VCPP55072 EEF1B2P6-201ENST00000445713 673 ntBASIC6.23□□□□□ -1.41
VCPP55072 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 CBX1P5-201ENST00000475330 559 ntBASIC6.23□□□□□ -1.41
VCPP55072 AC004453.1-201ENST00000487895 408 ntBASIC6.23□□□□□ -1.41
VCPP55072 RN7SL30P-201ENST00000488416 306 ntBASIC6.23□□□□□ -1.41
VCPP55072 GAPDHP71-201ENST00000511530 1003 ntBASIC6.23□□□□□ -1.41
VCPP55072 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.23□□□□□ -1.41
VCPP55072 snoU109.5-201ENST00000516231 132 ntBASIC6.23□□□□□ -1.41
VCPP55072 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
VCPP55072 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.23□□□□□ -1.41
VCPP55072 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.23□□□□□ -1.41
VCPP55072 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.23□□□□□ -1.41
VCPP55072 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.23□□□□□ -1.41
VCPP55072 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.23□□□□□ -1.41
VCPP55072 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.23□□□□□ -1.41
VCPP55072 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.23□□□□□ -1.41
VCPP55072 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.23□□□□□ -1.41
VCPP55072 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.23□□□□□ -1.41
VCPP55072 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.23□□□□□ -1.41
VCPP55072 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.23□□□□□ -1.41
VCPP55072 uc_338.26-201ENST00000612659 160 ntBASIC6.23□□□□□ -1.41
VCPP55072 AC096861.1-201ENST00000616652 240 ntBASIC6.23□□□□□ -1.41
VCPP55072 AL355974.3-201ENST00000617383 467 ntBASIC6.23□□□□□ -1.41
VCPP55072 AC132825.8-201ENST00000640783 297 ntBASIC6.23□□□□□ -1.41
VCPP55072 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
VCPP55072 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 THAP12P9-201ENST00000503971 2360 ntBASIC6.23□□□□□ -1.41
VCPP55072 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
VCPP55072 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.23□□□□□ -1.41
VCPP55072 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VCPP55072 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
VCPP55072 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
VCPP55072 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.22□□□□□ -1.41
VCPP55072 AL359955.1-201ENST00000455242 3275 ntBASIC6.22□□□□□ -1.41
VCPP55072 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VCPP55072 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VCPP55072 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VCPP55072 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VCPP55072 RN7SKP103-201ENST00000363848 320 ntBASIC6.22□□□□□ -1.41
VCPP55072 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.22□□□□□ -1.41
VCPP55072 AL391422.1-201ENST00000402155 436 ntBASIC6.22□□□□□ -1.41
VCPP55072 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
VCPP55072 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.22□□□□□ -1.41
VCPP55072 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VCPP55072 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.22□□□□□ -1.41
VCPP55072 AL662874.1-201ENST00000426065 230 ntBASIC6.22□□□□□ -1.41
VCPP55072 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.22□□□□□ -1.41
VCPP55072 AL136455.1-201ENST00000441083 1240 ntBASIC6.22□□□□□ -1.41
VCPP55072 TRIM60P16-201ENST00000444048 694 ntBASIC6.22□□□□□ -1.41
VCPP55072 EEF1B2P5-201ENST00000444820 548 ntBASIC6.22□□□□□ -1.41
VCPP55072 REG1CP-206ENST00000447469 496 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms