Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.63□□□□□ -1.51
PDX1P52945 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.63□□□□□ -1.51
PDX1P52945 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.63□□□□□ -1.51
PDX1P52945 AL162739.1-201ENST00000450606 307 ntBASIC5.63□□□□□ -1.51
PDX1P52945 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 SBDSP1-204ENST00000453858 737 ntBASIC5.63□□□□□ -1.51
PDX1P52945 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.63□□□□□ -1.51
PDX1P52945 AL133445.1-201ENST00000467051 452 ntBASIC5.63□□□□□ -1.51
PDX1P52945 TRBV8-1-201ENST00000481590 279 ntBASIC5.63□□□□□ -1.51
PDX1P52945 AC022215.1-201ENST00000481770 362 ntBASIC5.63□□□□□ -1.51
PDX1P52945 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PDX1P52945 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.63□□□□□ -1.51
PDX1P52945 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDX1P52945 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.63□□□□□ -1.51
PDX1P52945 HMGB1P42-201ENST00000532126 553 ntBASIC5.63□□□□□ -1.51
PDX1P52945 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.63□□□□□ -1.51
PDX1P52945 AC011270.1-201ENST00000558606 583 ntBASIC5.63□□□□□ -1.51
PDX1P52945 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.63□□□□□ -1.51
PDX1P52945 BX322635.1-201ENST00000605804 496 ntBASIC5.63□□□□□ -1.51
PDX1P52945 AL139099.4-201ENST00000614802 114 ntBASIC5.63□□□□□ -1.51
PDX1P52945 AC007204.2-201ENST00000615022 616 ntBASIC5.63□□□□□ -1.51
PDX1P52945 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDX1P52945 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDX1P52945 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDX1P52945 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDX1P52945 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDX1P52945 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDX1P52945 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDX1P52945 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.63□□□□□ -1.51
PDX1P52945 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDX1P52945 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
PDX1P52945 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.62□□□□□ -1.51
PDX1P52945 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PDX1P52945 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
PDX1P52945 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDX1P52945 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.62□□□□□ -1.51
PDX1P52945 MIR105-2-201ENST00000385083 81 ntBASIC5.62□□□□□ -1.51
PDX1P52945 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.62□□□□□ -1.51
PDX1P52945 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.62□□□□□ -1.51
PDX1P52945 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.62□□□□□ -1.51
PDX1P52945 OR6E1P-201ENST00000414424 923 ntBASIC5.62□□□□□ -1.51
PDX1P52945 AL365220.1-201ENST00000432923 399 ntBASIC5.62□□□□□ -1.51
PDX1P52945 RSL24D1P8-201ENST00000434442 492 ntBASIC5.62□□□□□ -1.51
PDX1P52945 FMO7P-201ENST00000436045 768 ntBASIC5.62□□□□□ -1.51
PDX1P52945 AC012075.1-201ENST00000436549 580 ntBASIC5.62□□□□□ -1.51
PDX1P52945 RAD1P2-201ENST00000446414 663 ntBASIC5.62□□□□□ -1.51
PDX1P52945 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.62□□□□□ -1.51
PDX1P52945 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 OR7E157P-201ENST00000494376 911 ntBASIC5.62□□□□□ -1.51
PDX1P52945 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.62□□□□□ -1.51
PDX1P52945 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 RN7SKP67-201ENST00000515905 235 ntBASIC5.62□□□□□ -1.51
PDX1P52945 RNU6-615P-201ENST00000516065 106 ntBASIC5.62□□□□□ -1.51
PDX1P52945 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.62□□□□□ -1.51
PDX1P52945 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.62□□□□□ -1.51
PDX1P52945 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.62□□□□□ -1.51
PDX1P52945 AC067805.1-201ENST00000559344 470 ntBASIC5.62□□□□□ -1.51
PDX1P52945 AC245128.3-201ENST00000594721 748 ntBASIC5.62□□□□□ -1.51
PDX1P52945 BNIP3P32-201ENST00000600015 554 ntBASIC5.62□□□□□ -1.51
PDX1P52945 AL713998.2-201ENST00000604538 1198 ntBASIC5.62□□□□□ -1.51
PDX1P52945 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.62□□□□□ -1.51
PDX1P52945 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.62□□□□□ -1.51
PDX1P52945 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.62□□□□□ -1.51
PDX1P52945 AC117490.2-201ENST00000610042 594 ntBASIC5.62□□□□□ -1.51
PDX1P52945 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.62□□□□□ -1.51
PDX1P52945 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.62□□□□□ -1.51
PDX1P52945 CFTRP2-201ENST00000634304 199 ntBASIC5.62□□□□□ -1.51
PDX1P52945 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PDX1P52945 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDX1P52945 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
PDX1P52945 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.62□□□□□ -1.51
PDX1P52945 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PDX1P52945 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDX1P52945 AC007842.1-201ENST00000597336 2039 ntBASIC5.62□□□□□ -1.51
PDX1P52945 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDX1P52945 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PDX1P52945 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PDX1P52945 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.61□□□□□ -1.51
PDX1P52945 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 OR5T3-201ENST00000303059 1023 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms