Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.23□□□□□ -1.41
CLCN3P51790 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.23□□□□□ -1.41
CLCN3P51790 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
CLCN3P51790 AC018809.2-201ENST00000602436 3823 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CLCN3P51790 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.23□□□□□ -1.41
CLCN3P51790 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CLCN3P51790 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.23□□□□□ -1.41
CLCN3P51790 RN7SKP28-201ENST00000364770 305 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 RPL23AP17-201ENST00000401064 499 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 RN7SKP278-201ENST00000410504 342 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 RPL35AP24-201ENST00000413846 330 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.23□□□□□ -1.41
CLCN3P51790 SPRYD7P1-201ENST00000443861 570 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.23□□□□□ -1.41
CLCN3P51790 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.23□□□□□ -1.41
CLCN3P51790 AGGF1P7-201ENST00000562369 913 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.23□□□□□ -1.41
CLCN3P51790 AC107993.1-201ENST00000591343 684 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 AC005840.5-201ENST00000619166 599 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 MIR8080-201ENST00000622224 89 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CLCN3P51790 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CLCN3P51790 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.23□□□□□ -1.41
CLCN3P51790 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.23□□□□□ -1.41
CLCN3P51790 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
CLCN3P51790 AC006600.2-201ENST00000624834 2506 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CLCN3P51790 AL591135.1-201ENST00000401578 5914 ntBASIC6.23□□□□□ -1.41
CLCN3P51790 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.22□□□□□ -1.41
CLCN3P51790 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.22□□□□□ -1.41
CLCN3P51790 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.22□□□□□ -1.41
CLCN3P51790 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.22□□□□□ -1.41
CLCN3P51790 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CLCN3P51790 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
CLCN3P51790 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.22□□□□□ -1.41
CLCN3P51790 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.22□□□□□ -1.41
CLCN3P51790 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.22□□□□□ -1.41
CLCN3P51790 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.22□□□□□ -1.41
CLCN3P51790 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 AL355433.1-201ENST00000422804 300 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 CRIP1P1-201ENST00000427567 185 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.22□□□□□ -1.41
CLCN3P51790 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.22□□□□□ -1.41
CLCN3P51790 AC011225.1-201ENST00000457751 369 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 OR2A3P-201ENST00000493774 953 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.22□□□□□ -1.41
CLCN3P51790 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.22□□□□□ -1.41
CLCN3P51790 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.22□□□□□ -1.41
CLCN3P51790 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.22□□□□□ -1.41
CLCN3P51790 AL049874.4-201ENST00000557593 255 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.22□□□□□ -1.41
CLCN3P51790 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.22□□□□□ -1.41
CLCN3P51790 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.22□□□□□ -1.41
CLCN3P51790 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.22□□□□□ -1.41
CLCN3P51790 AL513327.3-201ENST00000602618 469 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 SUGT1P3-202ENST00000604259 383 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 AC010245.2-201ENST00000606908 1167 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 AC132068.1-201ENST00000623805 459 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 AC018659.2-201ENST00000624690 715 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CLCN3P51790 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
CLCN3P51790 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.22□□□□□ -1.41
CLCN3P51790 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
CLCN3P51790 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CLCN3P51790 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CLCN3P51790 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.22□□□□□ -1.41
CLCN3P51790 ZNF101P1-201ENST00000435701 1720 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CLCN3P51790 AP000547.3-204ENST00000588548 2523 ntBASIC6.22□□□□□ -1.41
CLCN3P51790 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.22□□□□□ -1.41
CLCN3P51790 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms