Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC1P35251 RPL12P39-201ENST00000455456 496 ntBASIC6.11□□□□□ -1.43
RFC1P35251 AC093166.4-201ENST00000457867 318 ntBASIC6.11□□□□□ -1.43
RFC1P35251 RNU1-88P-201ENST00000459274 128 ntBASIC6.11□□□□□ -1.43
RFC1P35251 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.11□□□□□ -1.43
RFC1P35251 AC093827.1-201ENST00000480094 861 ntBASIC6.11□□□□□ -1.43
RFC1P35251 RN7SL57P-201ENST00000493687 290 ntBASIC6.11□□□□□ -1.43
RFC1P35251 AC025458.1-201ENST00000506046 166 ntBASIC6.11□□□□□ -1.43
RFC1P35251 Y_RNA.667-201ENST00000516212 107 ntBASIC6.11□□□□□ -1.43
RFC1P35251 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.11□□□□□ -1.43
RFC1P35251 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC1P35251 AC025423.2-201ENST00000537570 439 ntBASIC6.11□□□□□ -1.43
RFC1P35251 AL163952.1-202ENST00000569625 600 ntBASIC6.11□□□□□ -1.43
RFC1P35251 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.11□□□□□ -1.43
RFC1P35251 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.11□□□□□ -1.43
RFC1P35251 AL513327.3-201ENST00000602618 469 ntBASIC6.11□□□□□ -1.43
RFC1P35251 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.11□□□□□ -1.43
RFC1P35251 AC144521.1-201ENST00000607148 956 ntBASIC6.11□□□□□ -1.43
RFC1P35251 AL138960.2-201ENST00000625145 535 ntBASIC6.11□□□□□ -1.43
RFC1P35251 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC1P35251 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC1P35251 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.11□□□□□ -1.43
RFC1P35251 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC1P35251 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC1P35251 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC1P35251 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFC1P35251 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFC1P35251 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.1□□□□□ -1.43
RFC1P35251 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 BCORP1-203ENST00000513194 5093 ntBASIC6.1□□□□□ -1.43
RFC1P35251 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 RNA5SP500-201ENST00000364486 119 ntBASIC6.1□□□□□ -1.43
RFC1P35251 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
RFC1P35251 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.1□□□□□ -1.43
RFC1P35251 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC1P35251 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.1□□□□□ -1.43
RFC1P35251 PRUNEP1-201ENST00000425846 705 ntBASIC6.1□□□□□ -1.43
RFC1P35251 AL390879.2-203ENST00000426943 1121 ntBASIC6.1□□□□□ -1.43
RFC1P35251 DEFA9P-201ENST00000433042 285 ntBASIC6.1□□□□□ -1.43
RFC1P35251 GAPDHP48-201ENST00000436626 961 ntBASIC6.1□□□□□ -1.43
RFC1P35251 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.1□□□□□ -1.43
RFC1P35251 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC1P35251 AL122020.1-201ENST00000472287 459 ntBASIC6.1□□□□□ -1.43
RFC1P35251 AC093719.1-201ENST00000480427 441 ntBASIC6.1□□□□□ -1.43
RFC1P35251 AC099521.1-201ENST00000482557 334 ntBASIC6.1□□□□□ -1.43
RFC1P35251 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.1□□□□□ -1.43
RFC1P35251 ST13P12-201ENST00000508958 1094 ntBASIC6.1□□□□□ -1.43
RFC1P35251 AC019227.1-201ENST00000526902 510 ntBASIC6.1□□□□□ -1.43
RFC1P35251 BCAS2P1-201ENST00000528022 632 ntBASIC6.1□□□□□ -1.43
RFC1P35251 TOMM20P1-201ENST00000534518 427 ntBASIC6.1□□□□□ -1.43
RFC1P35251 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.1□□□□□ -1.43
RFC1P35251 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
RFC1P35251 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.1□□□□□ -1.43
RFC1P35251 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.1□□□□□ -1.43
RFC1P35251 VN1R81P-201ENST00000602085 372 ntBASIC6.1□□□□□ -1.43
RFC1P35251 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.1□□□□□ -1.43
RFC1P35251 AC008833.1-201ENST00000611633 691 ntBASIC6.1□□□□□ -1.43
RFC1P35251 AC020763.5-201ENST00000623298 430 ntBASIC6.1□□□□□ -1.43
RFC1P35251 AC080188.3-201ENST00000624842 748 ntBASIC6.1□□□□□ -1.43
RFC1P35251 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RFC1P35251 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC1P35251 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC1P35251 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
RFC1P35251 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFC1P35251 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFC1P35251 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFC1P35251 Z83820.1-201ENST00000456978 1499 ntBASIC6.09□□□□□ -1.43
RFC1P35251 AC016745.2-201ENST00000608834 3443 ntBASIC6.09□□□□□ -1.43
RFC1P35251 OR51C1P-202ENST00000641159 1444 ntBASIC6.09□□□□□ -1.43
RFC1P35251 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.09□□□□□ -1.43
RFC1P35251 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFC1P35251 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFC1P35251 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.09□□□□□ -1.43
RFC1P35251 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RFC1P35251 RNA5SP433-201ENST00000364491 114 ntBASIC6.09□□□□□ -1.43
RFC1P35251 OR6K3-202ENST00000368146 996 ntBASIC6.09□□□□□ -1.43
RFC1P35251 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.09□□□□□ -1.43
RFC1P35251 RNA5SP91-201ENST00000390902 119 ntBASIC6.09□□□□□ -1.43
RFC1P35251 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.09□□□□□ -1.43
RFC1P35251 RNU2-72P-201ENST00000411175 163 ntBASIC6.09□□□□□ -1.43
RFC1P35251 MRPL53P1-201ENST00000414323 319 ntBASIC6.09□□□□□ -1.43
RFC1P35251 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.09□□□□□ -1.43
RFC1P35251 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.09□□□□□ -1.43
RFC1P35251 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.09□□□□□ -1.43
RFC1P35251 NDUFA5P1-201ENST00000433858 341 ntBASIC6.09□□□□□ -1.43
RFC1P35251 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.09□□□□□ -1.43
RFC1P35251 AC073072.2-201ENST00000447425 348 ntBASIC6.09□□□□□ -1.43
RFC1P35251 MTND2P39-201ENST00000457230 764 ntBASIC6.09□□□□□ -1.43
RFC1P35251 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.09□□□□□ -1.43
RFC1P35251 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFC1P35251 AC016687.1-201ENST00000482574 353 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms