Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 HMGN1P8-201ENST00000463578 288 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 OR7E157P-201ENST00000494376 911 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN3P26045 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN3P26045 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN3P26045 GAPDHP62-201ENST00000515313 990 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 SNORA48.9-201ENST00000516419 162 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN3P26045 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN3P26045 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN3P26045 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN3P26045 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN3P26045 AGGF1P7-201ENST00000562369 913 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 AC092121.1-201ENST00000569452 202 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.82□□□□□ -1.48
PTPN3P26045 DHFRP1-201ENST00000579682 559 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.82□□□□□ -1.48
PTPN3P26045 AC067773.1-201ENST00000603284 1094 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 AL353729.2-201ENST00000605859 1249 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 AC108865.2-201ENST00000606881 432 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 AC015712.7-201ENST00000615211 635 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN3P26045 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN3P26045 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN3P26045 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.82□□□□□ -1.48
PTPN3P26045 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTPN3P26045 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN3P26045 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN3P26045 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN3P26045 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN3P26045 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN3P26045 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.82□□□□□ -1.48
PTPN3P26045 MTND5P23-201ENST00000430812 1655 ntBASIC5.82□□□□□ -1.48
PTPN3P26045 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPN3P26045 AL355488.2-201ENST00000609909 2850 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 AC009962.1-201ENST00000567327 3813 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PTPN3P26045 AL442128.2-201ENST00000620246 1824 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN3P26045 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN3P26045 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
PTPN3P26045 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN3P26045 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN3P26045 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN3P26045 WDR95P-201ENST00000425638 1542 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 PROS2P-201ENST00000474651 1951 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN3P26045 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTPN3P26045 RNA5SP326-201ENST00000363209 110 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 RNU6-697P-201ENST00000363348 107 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 OR7E101P-201ENST00000400428 513 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN3P26045 AC096921.1-201ENST00000411661 375 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.81□□□□□ -1.48
PTPN3P26045 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN3P26045 RSL24D1P2-201ENST00000445584 366 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 RPS23P9-201ENST00000448848 438 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN3P26045 PFN1P8-201ENST00000497012 543 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 NENFP3-201ENST00000503735 313 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPN3P26045 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN3P26045 AC006499.4-201ENST00000510947 694 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPN3P26045 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN3P26045 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPN3P26045 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPN3P26045 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.81□□□□□ -1.48
PTPN3P26045 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPN3P26045 HSPE1P2-201ENST00000554777 306 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 AL121839.1-201ENST00000556233 1185 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.81□□□□□ -1.48
PTPN3P26045 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTPN3P26045 AC129915.3-201ENST00000634128 948 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN3P26045 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN3P26045 CDC27P2-201ENST00000425026 1922 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PTPN3P26045 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN3P26045 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN3P26045 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN3P26045 AL161912.4-201ENST00000623889 2468 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN3P26045 AC007842.1-201ENST00000597336 2039 ntBASIC5.81□□□□□ -1.48
PTPN3P26045 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PTPN3P26045 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
PTPN3P26045 UGT2B24P-201ENST00000514441 1597 ntBASIC5.8□□□□□ -1.48
PTPN3P26045 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN3P26045 AC114774.1-201ENST00000507410 1770 ntBASIC5.8□□□□□ -1.48
PTPN3P26045 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN3P26045 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN3P26045 SAMMSON-210ENST00000641260 1308 ntBASIC5.8□□□□□ -1.48
PTPN3P26045 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN3P26045 GTF2IP4-201ENST00000453092 2054 ntBASIC5.8□□□□□ -1.48
PTPN3P26045 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN3P26045 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTPN3P26045 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms