Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH3P22223 SNORA48.9-201ENST00000516419 162 ntBASIC5.75□□□□□ -1.49
CDH3P22223 PCNAP4-201ENST00000532690 730 ntBASIC5.75□□□□□ -1.49
CDH3P22223 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH3P22223 EIF1AXP2-201ENST00000555940 413 ntBASIC5.75□□□□□ -1.49
CDH3P22223 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH3P22223 AC119403.2-201ENST00000590960 598 ntBASIC5.75□□□□□ -1.49
CDH3P22223 FAM27E4-201ENST00000605259 342 ntBASIC5.75□□□□□ -1.49
CDH3P22223 AL022394.1-201ENST00000606979 292 ntBASIC5.75□□□□□ -1.49
CDH3P22223 AC138965.3-201ENST00000623875 498 ntBASIC5.75□□□□□ -1.49
CDH3P22223 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH3P22223 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.75□□□□□ -1.49
CDH3P22223 MAPK10-350ENST00000641777 965 ntBASIC5.75□□□□□ -1.49
CDH3P22223 CASC19-255ENST00000641733 1385 ntBASIC5.75□□□□□ -1.49
CDH3P22223 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH3P22223 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CDH3P22223 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH3P22223 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH3P22223 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CDH3P22223 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CDH3P22223 AC093849.1-201ENST00000563631 2209 ntBASIC5.74□□□□□ -1.49
CDH3P22223 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CDH3P22223 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 SELENOWP1-201ENST00000322792 252 ntBASIC5.74□□□□□ -1.49
CDH3P22223 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CDH3P22223 RN7SKP128-201ENST00000364270 303 ntBASIC5.74□□□□□ -1.49
CDH3P22223 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH3P22223 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
CDH3P22223 RN7SKP166-201ENST00000410812 305 ntBASIC5.74□□□□□ -1.49
CDH3P22223 AL354890.1-201ENST00000413730 346 ntBASIC5.74□□□□□ -1.49
CDH3P22223 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH3P22223 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH3P22223 AL034379.1-201ENST00000423216 253 ntBASIC5.74□□□□□ -1.49
CDH3P22223 PCBP2P1-201ENST00000437262 977 ntBASIC5.74□□□□□ -1.49
CDH3P22223 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH3P22223 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH3P22223 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH3P22223 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH3P22223 OSTCP1-201ENST00000455507 450 ntBASIC5.74□□□□□ -1.49
CDH3P22223 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH3P22223 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH3P22223 SNORD116-30-201ENST00000516468 85 ntBASIC5.74□□□□□ -1.49
CDH3P22223 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH3P22223 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH3P22223 AP000859.1-201ENST00000525536 307 ntBASIC5.74□□□□□ -1.49
CDH3P22223 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH3P22223 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH3P22223 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH3P22223 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH3P22223 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH3P22223 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH3P22223 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.74□□□□□ -1.49
CDH3P22223 AC087468.1-201ENST00000604365 630 ntBASIC5.74□□□□□ -1.49
CDH3P22223 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH3P22223 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 AC091305.2-201ENST00000624049 1576 ntBASIC5.74□□□□□ -1.49
CDH3P22223 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH3P22223 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CDH3P22223 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
CDH3P22223 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH3P22223 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 MTCO1P15-201ENST00000529569 1526 ntBASIC5.74□□□□□ -1.49
CDH3P22223 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH3P22223 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH3P22223 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH3P22223 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH3P22223 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH3P22223 NEPNP-201ENST00000404786 1371 ntBASIC5.73□□□□□ -1.49
CDH3P22223 OR52B3P-201ENST00000314715 928 ntBASIC5.73□□□□□ -1.49
CDH3P22223 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDH3P22223 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDH3P22223 AC016739.1-201ENST00000405359 345 ntBASIC5.73□□□□□ -1.49
CDH3P22223 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH3P22223 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH3P22223 RPS27AP6-201ENST00000427962 448 ntBASIC5.73□□□□□ -1.49
CDH3P22223 AC126120.1-201ENST00000431082 470 ntBASIC5.73□□□□□ -1.49
CDH3P22223 AL445928.1-201ENST00000435545 222 ntBASIC5.73□□□□□ -1.49
CDH3P22223 RPS7P3-201ENST00000443360 580 ntBASIC5.73□□□□□ -1.49
CDH3P22223 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH3P22223 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH3P22223 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH3P22223 ACA64.4-201ENST00000459070 127 ntBASIC5.73□□□□□ -1.49
CDH3P22223 AC011476.1-201ENST00000466725 307 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms