Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.6□□□□□ -1.19
LIG1P18858 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.6□□□□□ -1.19
LIG1P18858 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 MTND5P13-201ENST00000513046 1079 ntBASIC7.6□□□□□ -1.19
LIG1P18858 RN7SKP34-201ENST00000516142 244 ntBASIC7.6□□□□□ -1.19
LIG1P18858 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC7.6□□□□□ -1.19
LIG1P18858 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC7.6□□□□□ -1.19
LIG1P18858 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.6□□□□□ -1.19
LIG1P18858 AL512310.9-201ENST00000553311 948 ntBASIC7.6□□□□□ -1.19
LIG1P18858 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.6□□□□□ -1.19
LIG1P18858 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 AL354943.1-201ENST00000572103 781 ntBASIC7.6□□□□□ -1.19
LIG1P18858 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LIG1P18858 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.6□□□□□ -1.19
LIG1P18858 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 MTCO3P22-201ENST00000603219 784 ntBASIC7.6□□□□□ -1.19
LIG1P18858 AC124312.4-201ENST00000605533 310 ntBASIC7.6□□□□□ -1.19
LIG1P18858 AL354976.1-201ENST00000613843 387 ntBASIC7.6□□□□□ -1.19
LIG1P18858 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 AC012254.5-201ENST00000623573 478 ntBASIC7.6□□□□□ -1.19
LIG1P18858 AC135068.11-201ENST00000636378 921 ntBASIC7.6□□□□□ -1.19
LIG1P18858 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 ZNF101P1-201ENST00000435701 1720 ntBASIC7.6□□□□□ -1.19
LIG1P18858 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.6□□□□□ -1.19
LIG1P18858 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LIG1P18858 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 MTND5P29-201ENST00000458676 1807 ntBASIC7.59□□□□□ -1.19
LIG1P18858 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG1P18858 SSXP3-201ENST00000442971 1300 ntBASIC7.59□□□□□ -1.19
LIG1P18858 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LIG1P18858 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG1P18858 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LIG1P18858 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LIG1P18858 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LIG1P18858 RNA5SP152-201ENST00000365184 110 ntBASIC7.59□□□□□ -1.19
LIG1P18858 RNU1-55P-201ENST00000365510 158 ntBASIC7.59□□□□□ -1.19
LIG1P18858 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LIG1P18858 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LIG1P18858 LDHAP5-201ENST00000394996 622 ntBASIC7.59□□□□□ -1.19
LIG1P18858 AL158825.1-201ENST00000414735 521 ntBASIC7.59□□□□□ -1.19
LIG1P18858 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG1P18858 AC000089.1-201ENST00000424559 801 ntBASIC7.59□□□□□ -1.19
LIG1P18858 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG1P18858 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG1P18858 AC098826.1-201ENST00000433943 471 ntBASIC7.59□□□□□ -1.19
LIG1P18858 MTND1P4-201ENST00000435196 415 ntBASIC7.59□□□□□ -1.19
LIG1P18858 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG1P18858 AL590399.4-201ENST00000436561 601 ntBASIC7.59□□□□□ -1.19
LIG1P18858 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG1P18858 AC008280.2-201ENST00000455473 307 ntBASIC7.59□□□□□ -1.19
LIG1P18858 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG1P18858 RPL23AP64-201ENST00000469465 435 ntBASIC7.59□□□□□ -1.19
LIG1P18858 RN7SL267P-201ENST00000485107 261 ntBASIC7.59□□□□□ -1.19
LIG1P18858 RPL9P15-201ENST00000491096 532 ntBASIC7.59□□□□□ -1.19
LIG1P18858 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG1P18858 AC083906.1-201ENST00000509298 406 ntBASIC7.59□□□□□ -1.19
LIG1P18858 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG1P18858 MTCO1P49-201ENST00000523429 802 ntBASIC7.59□□□□□ -1.19
LIG1P18858 AC131935.1-201ENST00000524621 333 ntBASIC7.59□□□□□ -1.19
LIG1P18858 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG1P18858 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG1P18858 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG1P18858 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG1P18858 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG1P18858 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG1P18858 MTND4LP24-201ENST00000572277 291 ntBASIC7.59□□□□□ -1.19
LIG1P18858 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.59□□□□□ -1.19
LIG1P18858 AL021997.1-201ENST00000605757 193 ntBASIC7.59□□□□□ -1.19
LIG1P18858 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 AL157770.1-201ENST00000623049 439 ntBASIC7.59□□□□□ -1.19
LIG1P18858 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LIG1P18858 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.59□□□□□ -1.19
LIG1P18858 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LIG1P18858 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.59□□□□□ -1.19
LIG1P18858 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.59□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms