Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOBP13765 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOBP13765 AC139426.3-201ENST00000605648 2059 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOBP13765 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOBP13765 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOBP13765 RNA5SP477-201ENST00000362639 119 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 RNU6-1331P-201ENST00000363658 106 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOBP13765 AC016739.1-201ENST00000405359 345 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 AL355143.1-201ENST00000407101 841 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 RN7SKP29-201ENST00000410957 272 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 BX284632.2-201ENST00000421091 399 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 AK3P5-201ENST00000432033 519 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 NDUFS5P5-201ENST00000437256 321 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 TUBB4BP6-201ENST00000437576 479 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 VN1R110P-201ENST00000438988 971 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 AL512605.1-202ENST00000441919 381 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 AL359955.2-201ENST00000445380 353 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 SUMO2P1-206ENST00000445436 284 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 RPL12P39-201ENST00000455456 496 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 AC019084.1-201ENST00000457337 432 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 AC018635.1-201ENST00000468292 1030 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 RN7SL741P-201ENST00000482473 289 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 RN7SKP157-201ENST00000516174 282 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 Y_RNA.667-201ENST00000516212 107 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 SCARNA18.1-201ENST00000516330 83 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 MTND1P6-201ENST00000523621 946 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 BCAS2P1-201ENST00000528022 632 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 PCNAP4-201ENST00000532690 730 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 AL133481.2-203ENST00000607558 139 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DOBP13765 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.21□□□□□ -1.58
HLA-DOBP13765 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOBP13765 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DOBP13765 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOBP13765 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOBP13765 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOBP13765 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOBP13765 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOBP13765 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOBP13765 RNA5SP500-201ENST00000364486 119 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOBP13765 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOBP13765 MIR620-201ENST00000385232 95 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 OR7E156P-201ENST00000400303 464 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 TRIM60P17-201ENST00000415181 719 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 NPM1P26-201ENST00000426339 738 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 BX323845.3-201ENST00000428215 527 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 DEFA9P-201ENST00000433042 285 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 GAPDHP48-201ENST00000436626 961 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 MRPS21P3-201ENST00000436696 262 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 KRT8P51-201ENST00000438938 274 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 ARL5AP3-201ENST00000439327 386 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 AC015983.1-201ENST00000441577 373 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 RNF2P1-201ENST00000442955 1010 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 AC009963.4-201ENST00000448535 339 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 RN7SL57P-201ENST00000493687 290 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 PCNAP1-201ENST00000505363 709 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 AC025458.1-201ENST00000506046 166 ntBASIC5.2□□□□□ -1.58
HLA-DOBP13765 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOBP13765 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOBP13765 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DOBP13765 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DOBP13765 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms