Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC067852.7-201ENST00000623270 535 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 AC009120.7-201ENST00000623452 780 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 AP003497.2-201ENST00000624220 967 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 OR1S1-201ENST00000624470 978 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COL6A2P12110 OR8A1-204ENST00000642111 1145 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COL6A2P12110 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
COL6A2P12110 AC012078.1-201ENST00000405035 1646 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.49□□□□□ -1.37
COL6A2P12110 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COL6A2P12110 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 SAMMSON-210ENST00000641260 1308 ntBASIC6.49□□□□□ -1.37
COL6A2P12110 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL6A2P12110 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 AC010329.1-201ENST00000593903 8328 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 YES1P1-201ENST00000418510 1628 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
COL6A2P12110 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 RNA5SP321-201ENST00000362722 111 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 RNU4-24P-201ENST00000364565 139 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 RNA5SP355-201ENST00000365317 135 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.48□□□□□ -1.37
COL6A2P12110 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.48□□□□□ -1.37
COL6A2P12110 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.48□□□□□ -1.37
COL6A2P12110 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 AL359694.1-201ENST00000403247 604 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 SNORA11D-201ENST00000408548 128 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 SNORA11E-201ENST00000408778 128 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 RNA5SP251-201ENST00000410614 137 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 RN7SKP161-201ENST00000411110 305 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 RAP1BP1-201ENST00000412709 553 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 AL929472.1-201ENST00000417484 429 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.48□□□□□ -1.37
COL6A2P12110 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.48□□□□□ -1.37
COL6A2P12110 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.48□□□□□ -1.37
COL6A2P12110 AC092685.1-201ENST00000447960 1243 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 OR51B8P-201ENST00000449892 769 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 HMGB1P5-202ENST00000451497 985 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.48□□□□□ -1.37
COL6A2P12110 RN7SL456P-201ENST00000469290 295 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 RPS3AP43-201ENST00000479743 781 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 RPL23AP44-201ENST00000482216 473 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.48□□□□□ -1.37
COL6A2P12110 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 RPF2P2-201ENST00000504693 896 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 RN7SKP242-201ENST00000515967 289 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 DEFB130C-202ENST00000530001 230 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.48□□□□□ -1.37
COL6A2P12110 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.48□□□□□ -1.37
COL6A2P12110 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.48□□□□□ -1.37
COL6A2P12110 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.48□□□□□ -1.37
COL6A2P12110 GARSP1-201ENST00000570895 719 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 RN7SL689P-201ENST00000577215 297 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL6A2P12110 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.48□□□□□ -1.37
COL6A2P12110 RPS27AP19-201ENST00000597285 458 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.48□□□□□ -1.37
COL6A2P12110 AL583856.2-201ENST00000606298 543 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 AL450489.1-201ENST00000612071 468 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 AC008121.2-201ENST00000614647 523 ntBASIC6.48□□□□□ -1.37
COL6A2P12110 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.48□□□□□ -1.37
COL6A2P12110 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.48□□□□□ -1.37
COL6A2P12110 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.48□□□□□ -1.37
COL6A2P12110 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL6A2P12110 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms