Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC034105.4-201ENST00000568304 277 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.17□□□□□ -1.58
SPTA1P02549 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.17□□□□□ -1.58
SPTA1P02549 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.17□□□□□ -1.58
SPTA1P02549 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SPTA1P02549 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.17□□□□□ -1.58
SPTA1P02549 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SPTA1P02549 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.17□□□□□ -1.58
SPTA1P02549 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
SPTA1P02549 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SPTA1P02549 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SPTA1P02549 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 RNA5SP505-201ENST00000364748 108 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 RN7SKP6-201ENST00000364795 319 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 RNA5SP30-201ENST00000365552 115 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 DUTP5-201ENST00000406790 469 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 AC004975.1-201ENST00000428733 208 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 DNAJC19P7-201ENST00000428811 344 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.17□□□□□ -1.58
SPTA1P02549 AC073594.1-201ENST00000462065 364 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 RPL7AP10-201ENST00000481016 791 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 IGHV1-14-201ENST00000523391 241 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 AC078878.1-201ENST00000539832 958 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 AC073916.1-201ENST00000545095 130 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.17□□□□□ -1.58
SPTA1P02549 AC093799.2-201ENST00000610062 578 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 AC012254.5-201ENST00000623573 478 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 HSPA8P14-201ENST00000552265 1805 ntBASIC5.17□□□□□ -1.58
SPTA1P02549 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SPTA1P02549 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC5.17□□□□□ -1.58
SPTA1P02549 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.17□□□□□ -1.58
SPTA1P02549 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SPTA1P02549 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC5.16□□□□□ -1.58
SPTA1P02549 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
SPTA1P02549 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
SPTA1P02549 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SPTA1P02549 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 SNORA51.8-201ENST00000384234 132 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 RNU11-6P-201ENST00000391127 133 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 CNOT7P1-201ENST00000429006 852 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 snoU13.22-201ENST00000459428 104 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 RN7SL51P-201ENST00000468230 285 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 RN7SL447P-201ENST00000494711 245 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 AC109635.6-201ENST00000525487 1113 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.16□□□□□ -1.58
SPTA1P02549 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.16□□□□□ -1.58
SPTA1P02549 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.16□□□□□ -1.58
SPTA1P02549 AC069307.1-201ENST00000602820 447 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 AC003992.1-201ENST00000635364 557 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 A2MP1-204ENST00000566278 4130 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SPTA1P02549 ZNF733P-202ENST00000444809 1573 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 AL133243.4-201ENST00000623116 3109 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.16□□□□□ -1.58
SPTA1P02549 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SPTA1P02549 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC5.16□□□□□ -1.58
SPTA1P02549 AL359837.1-201ENST00000381357 287 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 SNORA16A-201ENST00000384342 137 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.16□□□□□ -1.58
SPTA1P02549 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.16□□□□□ -1.58
SPTA1P02549 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 AL445928.1-201ENST00000435545 222 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.16□□□□□ -1.58
SPTA1P02549 RPS3AP53-201ENST00000454716 778 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 AC096741.1-201ENST00000472250 846 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.16□□□□□ -1.58
SPTA1P02549 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.16□□□□□ -1.58
SPTA1P02549 AL121579.2-201ENST00000555466 590 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SPTA1P02549 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.16□□□□□ -1.58
SPTA1P02549 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.16□□□□□ -1.58
SPTA1P02549 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SPTA1P02549 AL121768.1-201ENST00000613917 2544 ntBASIC5.16□□□□□ -1.58
SPTA1P02549 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.16□□□□□ -1.58
SPTA1P02549 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SPTA1P02549 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SPTA1P02549 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms