Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 MIR372-201ENST00000362225 67 ntBASIC2.36□□□□□ -2.03
USH2AO75445 MIR483-201ENST00000385070 76 ntBASIC2.36□□□□□ -2.03
USH2AO75445 SLC9B1P4-201ENST00000421957 1288 ntBASIC2.36□□□□□ -2.03
USH2AO75445 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC2.36□□□□□ -2.03
USH2AO75445 RN7SL352P-201ENST00000466002 277 ntBASIC2.36□□□□□ -2.03
USH2AO75445 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC2.36□□□□□ -2.03
USH2AO75445 SOX5P1-201ENST00000524155 1127 ntBASIC2.36□□□□□ -2.03
USH2AO75445 AC007346.2-201ENST00000564816 892 ntBASIC2.36□□□□□ -2.03
USH2AO75445 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 RNA5SP196-201ENST00000625967 102 ntBASIC2.36□□□□□ -2.03
USH2AO75445 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 PDE11A-201ENST00000286063 9275 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 AC005725.1-201ENST00000577346 2607 ntBASIC2.36□□□□□ -2.03
USH2AO75445 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 AC093578.1-201ENST00000415219 368 ntBASIC2.36□□□□□ -2.03
USH2AO75445 OR13Z1P-201ENST00000416141 834 ntBASIC2.36□□□□□ -2.03
USH2AO75445 RPL12P43-201ENST00000420608 499 ntBASIC2.36□□□□□ -2.03
USH2AO75445 KRT8P51-201ENST00000438938 274 ntBASIC2.36□□□□□ -2.03
USH2AO75445 TXNP5-201ENST00000441043 315 ntBASIC2.36□□□□□ -2.03
USH2AO75445 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC2.36□□□□□ -2.03
USH2AO75445 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC2.36□□□□□ -2.03
USH2AO75445 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 AL672167.2-201ENST00000377164 879 ntBASIC2.36□□□□□ -2.03
USH2AO75445 OR8V1P-201ENST00000395193 873 ntBASIC2.36□□□□□ -2.03
USH2AO75445 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 AL672138.1-201ENST00000450604 1015 ntBASIC2.36□□□□□ -2.03
USH2AO75445 RBMY2TP-201ENST00000451162 947 ntBASIC2.36□□□□□ -2.03
USH2AO75445 AC010733.1-201ENST00000451515 401 ntBASIC2.36□□□□□ -2.03
USH2AO75445 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC2.36□□□□□ -2.03
USH2AO75445 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC2.36□□□□□ -2.03
USH2AO75445 HMGB1P40-201ENST00000525121 540 ntBASIC2.36□□□□□ -2.03
USH2AO75445 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC2.36□□□□□ -2.03
USH2AO75445 PDCD6IPP2-207ENST00000566321 1069 ntBASIC2.36□□□□□ -2.03
USH2AO75445 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.36□□□□□ -2.03
USH2AO75445 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 AL445567.2-201ENST00000618935 498 ntBASIC2.36□□□□□ -2.03
USH2AO75445 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 AC120338.1-201ENST00000625074 1541 ntBASIC2.36□□□□□ -2.03
USH2AO75445 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC2.36□□□□□ -2.03
USH2AO75445 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 ZNF652P1-201ENST00000442420 1309 ntBASIC2.36□□□□□ -2.03
USH2AO75445 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.36□□□□□ -2.03
USH2AO75445 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH2AO75445 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC2.35□□□□□ -2.03
USH2AO75445 Y_RNA.111-201ENST00000363248 100 ntBASIC2.35□□□□□ -2.03
USH2AO75445 RNA5SP455-201ENST00000365190 119 ntBASIC2.35□□□□□ -2.03
USH2AO75445 MIR634-201ENST00000385208 97 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC2.35□□□□□ -2.03
USH2AO75445 AC006967.1-201ENST00000467608 589 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC2.35□□□□□ -2.03
USH2AO75445 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 AL121890.3-201ENST00000618494 516 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AL589993.1-201ENST00000407450 2524 ntBASIC2.35□□□□□ -2.03
USH2AO75445 AC017104.4-201ENST00000636283 1592 ntBASIC2.35□□□□□ -2.03
USH2AO75445 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH2AO75445 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms