Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX4O60224 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 AL691517.1-201ENST00000440833 1235 ntBASIC5.39□□□□□ -1.55
SSX4O60224 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX4O60224 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX4O60224 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX4O60224 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX4O60224 RN7SL369P-201ENST00000477138 299 ntBASIC5.39□□□□□ -1.55
SSX4O60224 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.39□□□□□ -1.55
SSX4O60224 RPSAP51-201ENST00000497462 645 ntBASIC5.39□□□□□ -1.55
SSX4O60224 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX4O60224 IGKV1D-22-201ENST00000518953 324 ntBASIC5.39□□□□□ -1.55
SSX4O60224 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX4O60224 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX4O60224 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.39□□□□□ -1.55
SSX4O60224 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX4O60224 AC092868.3-201ENST00000560515 784 ntBASIC5.39□□□□□ -1.55
SSX4O60224 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX4O60224 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX4O60224 AC009120.3-201ENST00000563335 499 ntBASIC5.39□□□□□ -1.55
SSX4O60224 AC007346.1-201ENST00000569208 867 ntBASIC5.39□□□□□ -1.55
SSX4O60224 AC027229.1-201ENST00000583887 253 ntBASIC5.39□□□□□ -1.55
SSX4O60224 AC008507.3-201ENST00000585753 472 ntBASIC5.39□□□□□ -1.55
SSX4O60224 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX4O60224 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX4O60224 RPL21P136-201ENST00000605378 396 ntBASIC5.39□□□□□ -1.55
SSX4O60224 AL592494.3-201ENST00000609485 464 ntBASIC5.39□□□□□ -1.55
SSX4O60224 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX4O60224 SNX18P12-201ENST00000624821 759 ntBASIC5.39□□□□□ -1.55
SSX4O60224 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX4O60224 AC016583.1-201ENST00000624221 2431 ntBASIC5.39□□□□□ -1.55
SSX4O60224 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SSX4O60224 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SSX4O60224 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 CCNT2P1-201ENST00000423082 1315 ntBASIC5.39□□□□□ -1.55
SSX4O60224 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX4O60224 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
SSX4O60224 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 AC010266.2-201ENST00000564741 3255 ntBASIC5.38□□□□□ -1.55
SSX4O60224 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX4O60224 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SSX4O60224 AC116158.1-201ENST00000560231 2129 ntBASIC5.38□□□□□ -1.55
SSX4O60224 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
SSX4O60224 RNA5SP510-201ENST00000364697 99 ntBASIC5.38□□□□□ -1.55
SSX4O60224 MIR433-201ENST00000384837 93 ntBASIC5.38□□□□□ -1.55
SSX4O60224 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SSX4O60224 RN7SKP144-201ENST00000411108 279 ntBASIC5.38□□□□□ -1.55
SSX4O60224 HMGN1P20-201ENST00000411849 300 ntBASIC5.38□□□□□ -1.55
SSX4O60224 AL158827.1-201ENST00000416300 391 ntBASIC5.38□□□□□ -1.55
SSX4O60224 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX4O60224 RPS27AP6-201ENST00000427962 448 ntBASIC5.38□□□□□ -1.55
SSX4O60224 MTND4LP14-201ENST00000429447 288 ntBASIC5.38□□□□□ -1.55
SSX4O60224 AL663074.2-201ENST00000440621 479 ntBASIC5.38□□□□□ -1.55
SSX4O60224 ATP5LP2-201ENST00000440646 311 ntBASIC5.38□□□□□ -1.55
SSX4O60224 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 AC023194.2-201ENST00000465398 406 ntBASIC5.38□□□□□ -1.55
SSX4O60224 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 RN7SL643P-201ENST00000471845 291 ntBASIC5.38□□□□□ -1.55
SSX4O60224 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX4O60224 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX4O60224 STRADBP1-201ENST00000478954 1281 ntBASIC5.38□□□□□ -1.55
SSX4O60224 RN7SL714P-201ENST00000487050 298 ntBASIC5.38□□□□□ -1.55
SSX4O60224 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.38□□□□□ -1.55
SSX4O60224 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX4O60224 COX6B1P4-201ENST00000519826 484 ntBASIC5.38□□□□□ -1.55
SSX4O60224 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX4O60224 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.38□□□□□ -1.55
SSX4O60224 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 AC079905.1-201ENST00000549280 475 ntBASIC5.38□□□□□ -1.55
SSX4O60224 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX4O60224 AP005136.2-201ENST00000583253 1049 ntBASIC5.38□□□□□ -1.55
SSX4O60224 RN7SL475P-201ENST00000583379 298 ntBASIC5.38□□□□□ -1.55
SSX4O60224 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX4O60224 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX4O60224 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX4O60224 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX4O60224 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms