Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM38O00635 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM38O00635 AC093510.2-201ENST00000562820 896 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AC090651.1-201ENST00000567865 634 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM38O00635 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.17□□□□□ -1.42
TRIM38O00635 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM38O00635 DNAJC19P3-201ENST00000594491 331 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM38O00635 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AC009237.12-201ENST00000604755 742 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AC100767.2-201ENST00000604840 693 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.17□□□□□ -1.42
TRIM38O00635 AC120053.1-201ENST00000607706 736 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AL158062.1-201ENST00000619632 745 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AC092159.4-201ENST00000624944 550 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AC022919.1-201ENST00000624979 626 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 MIR4302-201ENST00000638058 60 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TRIM38O00635 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM38O00635 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM38O00635 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TRIM38O00635 AL133243.2-201ENST00000610331 1621 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
TRIM38O00635 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM38O00635 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM38O00635 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM38O00635 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM38O00635 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM38O00635 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM38O00635 AOX3P-204ENST00000491025 2107 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 AL592494.2-201ENST00000425455 1548 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 AC093297.3-201ENST00000607056 2517 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 AC023490.2-201ENST00000359859 470 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TRIM38O00635 SUGT1P2-201ENST00000379452 992 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TRIM38O00635 RNU6-1176P-201ENST00000390955 107 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 AL031985.1-201ENST00000392713 418 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 AL512422.1-201ENST00000407033 553 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 PTGES3P2-201ENST00000407942 482 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 SNORA11B-201ENST00000408175 129 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM38O00635 RN7SKP144-201ENST00000411108 279 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 UBE2V1P14-201ENST00000415815 558 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM38O00635 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM38O00635 MTND4LP13-201ENST00000425022 298 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 MORF4L1P7-201ENST00000426038 703 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 RPS7P14-201ENST00000426405 583 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM38O00635 HIGD1AP16-201ENST00000450986 258 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM38O00635 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM38O00635 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM38O00635 AC021146.7-201ENST00000509604 775 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 MTATP6P1-201ENST00000514057 681 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM38O00635 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM38O00635 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM38O00635 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
TRIM38O00635 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM38O00635 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM38O00635 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM38O00635 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM38O00635 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM38O00635 AC245389.2-201ENST00000616023 576 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 AC242843.1-201ENST00000618702 573 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 AL163051.2-201ENST00000618976 735 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 AL512652.1-201ENST00000619006 500 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 AC105105.5-201ENST00000622635 1294 ntBASIC6.16□□□□□ -1.42
TRIM38O00635 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM38O00635 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM38O00635 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM38O00635 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM38O00635 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM38O00635 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM38O00635 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM38O00635 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM38O00635 MSL3P1-202ENST00000440028 1468 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM38O00635 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM38O00635 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TRIM38O00635 MTCO1P15-201ENST00000529569 1526 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms