Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 TAAR4P-201ENST00000454843 1039 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 RN7SL168P-201ENST00000463821 279 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 PSAT1P4-201ENST00000466500 526 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 ATP5LP5-201ENST00000483050 299 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 RN7SL570P-201ENST00000484405 292 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 RPL32P33-201ENST00000487023 394 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 RN7SL170P-201ENST00000487098 295 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 NPM1P28-201ENST00000492269 840 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.71□□□□□ -1.66
SDCBPO00560 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SDCBPO00560 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.71□□□□□ -1.66
SDCBPO00560 AC021193.1-201ENST00000511607 420 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 AC114781.3-201ENST00000512083 142 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.71□□□□□ -1.66
SDCBPO00560 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.71□□□□□ -1.66
SDCBPO00560 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.71□□□□□ -1.66
SDCBPO00560 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.71□□□□□ -1.66
SDCBPO00560 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.71□□□□□ -1.66
SDCBPO00560 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.71□□□□□ -1.66
SDCBPO00560 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.71□□□□□ -1.66
SDCBPO00560 AC002069.2-201ENST00000603580 883 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 AC024884.1-201ENST00000620583 399 ntBASIC4.71□□□□□ -1.66
SDCBPO00560 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SDCBPO00560 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SDCBPO00560 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SDCBPO00560 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.71□□□□□ -1.66
SDCBPO00560 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.71□□□□□ -1.66
SDCBPO00560 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.71□□□□□ -1.66
SDCBPO00560 AL359715.3-201ENST00000569267 2123 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SDCBPO00560 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.7□□□□□ -1.66
SDCBPO00560 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SDCBPO00560 RNA5SP500-201ENST00000364486 119 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 NPM1P25-201ENST00000429734 854 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.7□□□□□ -1.66
SDCBPO00560 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.7□□□□□ -1.66
SDCBPO00560 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.7□□□□□ -1.66
SDCBPO00560 NANOGP9-201ENST00000439890 892 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.7□□□□□ -1.66
SDCBPO00560 CBX1P2-201ENST00000453841 458 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 UBFD1P1-201ENST00000473259 814 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 SCARNA6.1-201ENST00000516989 238 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 AC021678.3-201ENST00000517893 476 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 PMS2P3-207ENST00000529061 717 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 OR5AM1P-201ENST00000532136 1032 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.7□□□□□ -1.66
SDCBPO00560 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.7□□□□□ -1.66
SDCBPO00560 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.7□□□□□ -1.66
SDCBPO00560 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.7□□□□□ -1.66
SDCBPO00560 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.7□□□□□ -1.66
SDCBPO00560 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.7□□□□□ -1.66
SDCBPO00560 AC092121.1-201ENST00000569452 202 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 LINC00556-201ENST00000569603 412 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.7□□□□□ -1.66
SDCBPO00560 FRG1EP-201ENST00000634469 770 ntBASIC4.7□□□□□ -1.66
SDCBPO00560 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SDCBPO00560 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.7□□□□□ -1.66
SDCBPO00560 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SDCBPO00560 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
SDCBPO00560 LINC02019-201ENST00000608605 2060 ntBASIC4.69□□□□□ -1.66
SDCBPO00560 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.69□□□□□ -1.66
SDCBPO00560 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
SDCBPO00560 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SDCBPO00560 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SDCBPO00560 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SDCBPO00560 NEPNP-201ENST00000404786 1371 ntBASIC4.69□□□□□ -1.66
SDCBPO00560 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SDCBPO00560 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
SDCBPO00560 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SDCBPO00560 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SDCBPO00560 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SDCBPO00560 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.69□□□□□ -1.66
SDCBPO00560 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.69□□□□□ -1.66
SDCBPO00560 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SDCBPO00560 PEX12P1-201ENST00000400284 1048 ntBASIC4.69□□□□□ -1.66
SDCBPO00560 AL358178.1-201ENST00000407698 397 ntBASIC4.69□□□□□ -1.66
SDCBPO00560 MIR1203-201ENST00000408812 85 ntBASIC4.69□□□□□ -1.66
SDCBPO00560 RPS6P23-201ENST00000413224 722 ntBASIC4.69□□□□□ -1.66
SDCBPO00560 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.69□□□□□ -1.66
SDCBPO00560 AL035660.1-201ENST00000422041 222 ntBASIC4.69□□□□□ -1.66
SDCBPO00560 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
SDCBPO00560 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.69□□□□□ -1.66
SDCBPO00560 BX323845.3-201ENST00000428215 527 ntBASIC4.69□□□□□ -1.66
SDCBPO00560 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.69□□□□□ -1.66
SDCBPO00560 RPL7P56-201ENST00000429441 717 ntBASIC4.69□□□□□ -1.66
SDCBPO00560 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.69□□□□□ -1.66
SDCBPO00560 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SDCBPO00560 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.69□□□□□ -1.66
SDCBPO00560 IGBP1P3-201ENST00000447449 1000 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms