Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC188H7C350 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC188H7C350 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CCDC188H7C350 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC188H7C350 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CCDC188H7C350 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC188H7C350 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC188H7C350 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC188H7C350 AC068870.1-201ENST00000563737 2455 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC188H7C350 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC188H7C350 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC188H7C350 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC188H7C350 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC188H7C350 AC027088.4-201ENST00000611559 1947 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC188H7C350 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC188H7C350 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC188H7C350 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC188H7C350 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 AC092111.2-201ENST00000611627 1414 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC188H7C350 OR56A4-201ENST00000330728 1209 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC188H7C350 RN7SKP184-201ENST00000362348 333 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC188H7C350 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC188H7C350 ARAFP1-201ENST00000422172 605 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 RAB9AP5-201ENST00000437794 597 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 RAB9AP2-201ENST00000443911 597 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 AL596266.1-201ENST00000448132 400 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC188H7C350 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC188H7C350 SEPT7P6-201ENST00000469999 1143 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC188H7C350 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC188H7C350 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC188H7C350 RNU6-751P-201ENST00000516382 101 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 AC113191.1-201ENST00000517759 403 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC188H7C350 AL078601.3-201ENST00000573303 535 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 AC004232.2-201ENST00000574245 821 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC188H7C350 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC188H7C350 AC005479.3-201ENST00000602790 431 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC188H7C350 RNU6-84P-201ENST00000607737 102 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC188H7C350 AC015819.1-201ENST00000613588 663 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC188H7C350 uc_338.7-201ENST00000621834 124 ntBASIC5.86□□□□□ -1.47
CCDC188H7C350 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC188H7C350 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CCDC188H7C350 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC188H7C350 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC188H7C350 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC188H7C350 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCDC188H7C350 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC188H7C350 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC188H7C350 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC188H7C350 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC188H7C350 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC188H7C350 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 RNU6-697P-201ENST00000363348 107 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 RNA5SP241-201ENST00000391326 114 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 PEX12P1-201ENST00000400284 1048 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC188H7C350 RPL7P56-201ENST00000429441 717 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC097463.1-201ENST00000447288 481 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC093166.4-201ENST00000457867 318 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 RN7SL254P-201ENST00000460609 284 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 UBFD1P1-201ENST00000473259 814 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 RPL12P24-201ENST00000474907 486 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 AP000797.2-201ENST00000475768 606 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC188H7C350 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC188H7C350 AC116158.1-201ENST00000560231 2129 ntBASIC5.85□□□□□ -1.47
CCDC188H7C350 MT1CP-201ENST00000567054 174 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms