Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC100784.1-201ENST00000522790 310 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC130364.2-201ENST00000528639 604 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC027369.5-201ENST00000533838 755 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AL390726.5-202ENST00000564800 256 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC006272.2-201ENST00000594725 163 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC015849.6-201ENST00000605454 474 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC016252.1-201ENST00000609721 474 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 MIR6813-201ENST00000621638 56 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC019072.1-201ENST00000604535 1551 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 EIF3EP1-201ENST00000433978 1316 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC010894.1-201ENST00000313760 361 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 SNORD94-201ENST00000386037 137 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC026310.1-201ENST00000396004 378 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AL078599.1-201ENST00000402075 293 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 SNORA81-201ENST00000408493 178 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AL356968.2-201ENST00000412769 1257 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 RPL12P9-201ENST00000412942 488 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 RPL35AP31-201ENST00000418340 337 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 RIMKLBP2-201ENST00000424737 654 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AL645939.3-201ENST00000435408 225 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AL445928.1-201ENST00000435545 222 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 HMGN1P32-201ENST00000441744 256 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 CYCSP24-201ENST00000445119 316 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AL445991.1-201ENST00000450381 475 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC044810.1-201ENST00000480271 711 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 GM2AP2-201ENST00000491764 562 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 DUTP1-201ENST00000493631 470 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC091912.1-201ENST00000511351 248 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC110056.1-201ENST00000525759 911 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC008126.1-201ENST00000549019 480 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 OR4C49P-201ENST00000563891 900 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 DPRXP4-201ENST00000578053 568 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 MIR4732-201ENST00000581873 76 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AP001823.1-201ENST00000604056 1003 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AL645933.2-201ENST00000606743 1207 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 AC048341.3-201ENST00000619323 491 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 CASC19-238ENST00000641523 1558 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 CR382285.2-201ENST00000624662 1495 ntBASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RBFOX3A6NFN3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms