Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AC093671.1-201ENST00000624981 2929 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 AL137141.1-201ENST00000624622 4836 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 U3.23-201ENST00000391132 200 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 VN1R21P-201ENST00000426703 765 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 RPL23AP19-201ENST00000436229 369 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 RPSAP37-201ENST00000470913 821 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 RPL32P33-201ENST00000487023 394 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 AC009120.1-201ENST00000493458 473 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 DUTP1-201ENST00000493631 470 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 ZNF322P1-201ENST00000568013 1209 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 MIR4260-201ENST00000583107 67 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 AC008521.2-201ENST00000591021 259 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 HIRAP1-201ENST00000605318 787 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 SNORA35B-201ENST00000607417 129 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 AL035661.1-201ENST00000620459 1144 ntBASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4BQ9Y4P1 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC092070.2-203ENST00000598377 3644 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 NEPNP-201ENST00000404786 1371 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AL159987.1-201ENST00000347911 293 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 U3.10-201ENST00000364459 214 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 RPL11P3-201ENST00000395256 523 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 OR7E101P-201ENST00000400428 513 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 RN7SKP279-201ENST00000411383 298 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC245060.4-201ENST00000413293 1121 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 METTL15P3-201ENST00000415522 1221 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 NIFKP3-201ENST00000417799 865 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AK4P4-201ENST00000419465 646 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 MRPS21P2-201ENST00000424704 264 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AP006222.1-205ENST00000450734 457 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC007998.1-201ENST00000474156 672 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 PSMA2P2-201ENST00000504319 686 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC113398.2-201ENST00000507630 558 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC026782.2-201ENST00000510845 636 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 SNORD46.2-201ENST00000516021 102 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 SCARNA6.1-201ENST00000516989 238 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC021678.3-201ENST00000517893 476 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC022826.1-201ENST00000519383 805 ntBASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.43□□□□□ -1.54
ATG4BQ9Y4P1 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms