Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 RNA5SP131-201ENST00000365452 119 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 OR7E156P-201ENST00000400303 464 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC099535.1-201ENST00000408928 371 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC007161.1-204ENST00000423039 460 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC115283.1-201ENST00000427353 400 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 RNU6-615P-201ENST00000516065 106 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC079064.1-201ENST00000528365 362 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 TRIM51DP-201ENST00000529746 596 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC079600.1-201ENST00000550326 297 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 IGBP1P1-201ENST00000554337 1009 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC107958.1-201ENST00000556576 290 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AC108865.2-201ENST00000606881 432 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AL359715.3-201ENST00000569267 2123 ntBASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS29Q9UBQ0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC120036.2-201ENST00000509729 1474 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC106872.5-201ENST00000508856 1416 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AL442128.2-201ENST00000620246 1824 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 RNA5SP394-201ENST00000364216 119 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 HMGB1P20-201ENST00000402555 677 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC113412.1-201ENST00000425840 504 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AL358876.1-201ENST00000453364 1075 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 SNRPCP3-201ENST00000474888 476 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC006499.4-201ENST00000510947 694 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC134669.1-201ENST00000581275 672 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 MIR7853-201ENST00000584820 132 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC079315.1-201ENST00000602952 623 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC025574.2-201ENST00000615621 514 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 uc_338.7-201ENST00000621834 124 ntBASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS29Q9UBQ0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms