Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 AC009237.13-201ENST00000603193 276 ntBASIC5.9□□□□□ -1.46
CISHQ9NSE2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CISHQ9NSE2 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.9□□□□□ -1.46
CISHQ9NSE2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.9□□□□□ -1.46
CISHQ9NSE2 AC132068.1-201ENST00000623805 459 ntBASIC5.9□□□□□ -1.46
CISHQ9NSE2 AL691477.1-201ENST00000624398 162 ntBASIC5.9□□□□□ -1.46
CISHQ9NSE2 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CISHQ9NSE2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.9□□□□□ -1.46
CISHQ9NSE2 AC015799.1-201ENST00000622996 3122 ntBASIC5.9□□□□□ -1.46
CISHQ9NSE2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
CISHQ9NSE2 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CISHQ9NSE2 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.9□□□□□ -1.47
CISHQ9NSE2 AC007998.4-201ENST00000612496 2533 ntBASIC5.9□□□□□ -1.47
CISHQ9NSE2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.9□□□□□ -1.47
CISHQ9NSE2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CISHQ9NSE2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.9□□□□□ -1.47
CISHQ9NSE2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 AC083899.1-201ENST00000454465 3819 ntBASIC5.89□□□□□ -1.47
CISHQ9NSE2 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CISHQ9NSE2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CISHQ9NSE2 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CISHQ9NSE2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
CISHQ9NSE2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 RN7SKP69-201ENST00000365390 305 ntBASIC5.89□□□□□ -1.47
CISHQ9NSE2 RN7SKP81-201ENST00000365603 331 ntBASIC5.89□□□□□ -1.47
CISHQ9NSE2 RN7SKP293-201ENST00000411389 296 ntBASIC5.89□□□□□ -1.47
CISHQ9NSE2 GABARAPL3-201ENST00000412799 354 ntBASIC5.89□□□□□ -1.47
CISHQ9NSE2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 AL358876.1-201ENST00000453364 1075 ntBASIC5.89□□□□□ -1.47
CISHQ9NSE2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 AC023141.9-201ENST00000458734 412 ntBASIC5.89□□□□□ -1.47
CISHQ9NSE2 RN7SL717P-201ENST00000478343 297 ntBASIC5.89□□□□□ -1.47
CISHQ9NSE2 AC104109.1-201ENST00000498563 436 ntBASIC5.89□□□□□ -1.47
CISHQ9NSE2 IGKV2-19-201ENST00000518132 283 ntBASIC5.89□□□□□ -1.47
CISHQ9NSE2 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 AP005403.1-201ENST00000579720 229 ntBASIC5.89□□□□□ -1.47
CISHQ9NSE2 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CISHQ9NSE2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CISHQ9NSE2 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CISHQ9NSE2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CISHQ9NSE2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
CISHQ9NSE2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CISHQ9NSE2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.89□□□□□ -1.47
CISHQ9NSE2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 RNA5SP242-201ENST00000364171 118 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 U3.28-201ENST00000391249 210 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 AC138761.5-201ENST00000433967 325 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 AC012075.1-201ENST00000436549 580 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 RN7SL466P-201ENST00000497546 295 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 AC021106.1-201ENST00000509020 1058 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 OR4A17P-201ENST00000526032 904 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 AC015720.2-201ENST00000567709 334 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 RN7SL371P-201ENST00000578099 267 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 SNORD95-201ENST00000579879 68 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 AL139124.1-201ENST00000609123 421 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 AC007938.2-201ENST00000604666 2634 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 AL049634.1-201ENST00000453770 1720 ntBASIC5.88□□□□□ -1.47
CISHQ9NSE2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.88□□□□□ -1.47
CISHQ9NSE2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CISHQ9NSE2 AC025470.1-201ENST00000510053 2032 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms