Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC011476.1-201ENST00000466725 307 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 RPL21P18-201ENST00000469899 480 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 UBFD1P1-201ENST00000473259 814 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 RPS17P11-201ENST00000474297 293 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 PRELID3BP7-201ENST00000503606 469 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 IGKV2-19-201ENST00000518132 283 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 SEC11B-201ENST00000518383 499 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC087373.1-201ENST00000524920 491 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC005000.1-201ENST00000536192 288 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC009094.1-201ENST00000564443 426 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC109446.2-201ENST00000567872 497 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 MIR4489-201ENST00000578869 62 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AP005136.1-201ENST00000579765 429 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AL353778.1-201ENST00000603149 408 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 MIR6798-201ENST00000612887 67 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AL139407.1-201ENST00000613826 1175 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AL512652.1-201ENST00000619006 500 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AL035461.2-201ENST00000619201 524 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC105105.5-201ENST00000622635 1294 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC017037.3-201ENST00000625016 472 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC125238.2-201ENST00000430003 1440 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 AC005261.2-201ENST00000593427 4258 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.07□□□□□ -1.28
PDLIM7Q9NR12 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AP003175.1-201ENST00000641383 6658 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AP002370.1-201ENST00000528055 1602 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AL731556.1-201ENST00000394628 3711 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 MIR937-201ENST00000401271 86 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 SNORA79B-201ENST00000410557 148 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 NPM1P26-201ENST00000426339 738 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC097721.1-201ENST00000427150 1253 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 TUBB4BP6-201ENST00000437576 479 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 RPL7P55-201ENST00000450522 746 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC016687.1-201ENST00000482574 353 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC134050.1-201ENST00000495088 933 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 OR2A20P-203ENST00000498397 1268 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 OR5H3P-201ENST00000502817 919 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC118282.2-201ENST00000508739 374 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC114781.3-201ENST00000512083 142 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 RNA5SP438-201ENST00000516561 112 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 IGKV1D-22-201ENST00000518953 324 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AL356801.1-201ENST00000559320 294 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC007225.2-201ENST00000562529 256 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 SNORD95-201ENST00000579879 68 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AL158042.1-201ENST00000605338 460 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC099785.1-201ENST00000605697 437 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC093673.2-201ENST00000609674 331 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 VN1R9P-201ENST00000614184 867 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 MIR6719-201ENST00000622428 87 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC012254.5-201ENST00000623573 478 ntBASIC7.06□□□□□ -1.28
PDLIM7Q9NR12 AC092184.1-201ENST00000625042 715 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms