Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AL031123.3-201ENST00000623345 1837 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AC019185.1-201ENST00000442718 389 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AC092106.1-201ENST00000444291 373 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 LRRC37A14P-201ENST00000452297 462 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AC007688.1-201ENST00000475592 759 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AC105420.1-201ENST00000504389 582 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 SCARNA20.4-201ENST00000516969 131 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AC026616.1-201ENST00000523157 525 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 OR4A43P-201ENST00000532938 908 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 OR8G3P-201ENST00000533406 921 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 MRPS21P7-201ENST00000566937 238 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AP005403.1-201ENST00000579720 229 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AP001496.3-201ENST00000580230 913 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 CFTRP2-201ENST00000634304 199 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 MIR1910-201ENST00000636955 80 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AC073869.8-201ENST00000641806 335 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AL592429.1-201ENST00000403909 1473 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 ABCA11P-202ENST00000504019 2110 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 NLRP3P1-201ENST00000622303 1785 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AC003973.3-201ENST00000624863 2822 ntBASIC5.93□□□□□ -1.46
SIX2Q9NPC8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIX2Q9NPC8 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AC015689.2-201ENST00000528172 1738 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AC092681.1-201ENST00000297369 291 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 SNORD56.6-201ENST00000384569 71 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 RNU2-18P-201ENST00000411224 162 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 GABARAPL3-201ENST00000412799 354 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AL133173.1-201ENST00000423458 397 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 FMO7P-201ENST00000436045 768 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 MTCO3P17-201ENST00000443775 513 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 RN7SL72P-201ENST00000460697 269 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 PSMA2P2-201ENST00000504319 686 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 PPATP2-201ENST00000605635 508 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AL118522.2-201ENST00000616045 615 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.92□□□□□ -1.46
SIX2Q9NPC8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SIX2Q9NPC8 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 BMS1P17-202ENST00000416720 316 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms