Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC000068.2-201ENST00000608816 460 ntBASIC5.02□□□□□ -1.61
KIAA1549Q9HCM3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.02□□□□□ -1.61
KIAA1549Q9HCM3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.02□□□□□ -1.61
KIAA1549Q9HCM3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KIAA1549Q9HCM3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KIAA1549Q9HCM3 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AC235565.1-201ENST00000456962 1325 ntBASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AL139148.1-201ENST00000427122 680 ntBASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 BX276092.6-201ENST00000430476 250 ntBASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 CLUHP1-201ENST00000435012 1190 ntBASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 BX276092.8-201ENST00000455722 250 ntBASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AC100832.1-201ENST00000471945 383 ntBASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 RN7SL727P-201ENST00000482164 296 ntBASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AC099521.1-201ENST00000482557 334 ntBASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AC097634.1-201ENST00000604491 2467 ntBASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 OR4F13P-202ENST00000560066 2054 ntBASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KIAA1549Q9HCM3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 RNU1-77P-201ENST00000390868 162 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 BRWD1P3-201ENST00000428816 390 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC245047.2-201ENST00000441060 530 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC079080.1-201ENST00000479841 822 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC078899.1-201ENST00000521432 1185 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 HNRNPCP1-201ENST00000556181 766 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AP000769.2-201ENST00000602344 396 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC007204.2-201ENST00000615022 616 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC021766.1-201ENST00000624404 741 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AL355834.1-201ENST00000556602 3965 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC137056.2-201ENST00000624055 1958 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
KIAA1549Q9HCM3 RMRPP5-201ENST00000411156 267 ntBASIC5□□□□□ -1.61
KIAA1549Q9HCM3 AC005297.1-201ENST00000444765 862 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms