Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 SNORA21-201ENST00000362423 132 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 RNU6-697P-201ENST00000363348 107 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 HMGB3P7-201ENST00000400214 611 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 HYALP1-201ENST00000417674 1279 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC130360.1-201ENST00000425489 1117 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC128677.1-201ENST00000436016 442 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 RPS12P17-201ENST00000438591 377 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC092106.1-201ENST00000444291 373 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 FTLP8-201ENST00000446770 267 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AL445991.1-201ENST00000450381 475 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 RN7SL790P-201ENST00000474043 298 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 RN7SL502P-201ENST00000481857 290 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC117500.1-201ENST00000497352 755 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC113398.2-201ENST00000507630 558 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC105384.2-201ENST00000508433 640 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 SNX18P25-201ENST00000510539 758 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 OSTC-204ENST00000512478 663 ntTSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC130365.2-201ENST00000525882 1201 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC122134.1-201ENST00000565664 1104 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC006120.1-201ENST00000579375 546 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC024267.2-201ENST00000582737 417 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AP005136.2-201ENST00000583253 1049 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 MIR7853-201ENST00000584820 132 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC008507.3-201ENST00000585753 472 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AL049829.3-202ENST00000604278 711 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AL078624.2-201ENST00000605063 554 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 RPSAP75-201ENST00000605848 301 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC010632.3-201ENST00000611377 369 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 FRG1EP-201ENST00000634469 770 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC093849.1-201ENST00000563631 2209 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AP000542.2-201ENST00000623199 6179 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC092376.2-201ENST00000622621 4116 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 AC093775.1-201ENST00000624154 1868 ntBASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 GNL2P1-201ENST00000451274 2190 ntBASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 RNU1-134P-201ENST00000362935 165 ntBASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 AC096921.1-201ENST00000411661 375 ntBASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 AC092646.1-201ENST00000427142 901 ntBASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 TMEM183AP1-205ENST00000432739 290 ntBASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 AL445928.1-201ENST00000435545 222 ntBASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 BTG3P1-201ENST00000435859 716 ntBASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 AC010086.1-201ENST00000437359 1052 ntBASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 AC015983.1-201ENST00000441577 373 ntBASIC3.79□□□□□ -1.8
SND1-IT1Q9HBX3 TCEA1P3-201ENST00000443005 880 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms