Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NAMPTP1-201ENST00000440465 2514 ntBASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.76□□□□□ -1.49
LRRC40Q9H9A6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 OR4F13P-202ENST00000560066 2054 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AC005042.1-201ENST00000393397 800 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AL022331.1-201ENST00000429025 477 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AC023271.1-201ENST00000445936 1090 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 NXT1P1-201ENST00000458481 316 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AC022215.1-201ENST00000481770 362 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AC091544.1-201ENST00000484702 348 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 RPL37P23-201ENST00000492641 294 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AC114781.3-201ENST00000512083 142 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 RNU6-943P-201ENST00000516960 98 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AC024405.1-201ENST00000532521 1042 ntBASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LRRC40Q9H9A6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 MIR133A2-201ENST00000347538 102 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 RNA5SP326-201ENST00000363209 110 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 RNA5SP30-201ENST00000365552 115 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AL589994.1-201ENST00000404962 340 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 NENFP1-201ENST00000419476 466 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC066692.1-201ENST00000421721 457 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AL512637.1-201ENST00000439523 1231 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 RPSAP37-201ENST00000470913 821 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 TRIM77BP-201ENST00000524985 1119 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 PMS2P3-207ENST00000529061 717 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 MTND2P17-201ENST00000550281 688 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC107958.1-201ENST00000556576 290 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC092121.1-201ENST00000569452 202 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 MIR4311-201ENST00000580794 100 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AL356752.1-201ENST00000615844 593 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 FO681491.1-202ENST00000623392 737 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 AC073869.7-201ENST00000640874 297 ntBASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.74□□□□□ -1.49
LRRC40Q9H9A6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms