Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RPL21P18-201ENST00000469899 480 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 SUMO1P1-201ENST00000497904 306 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 RNU6-311P-201ENST00000516224 102 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC091163.3-201ENST00000518269 1144 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 COX6B1P4-201ENST00000519826 484 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 TOMM20P1-201ENST00000534518 427 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 MTCYBP23-201ENST00000558717 1102 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC010735.1-201ENST00000567305 1026 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 MIR3157-201ENST00000578688 85 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC008751.2-201ENST00000597885 980 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AP004372.1-201ENST00000604842 844 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC106052.1-201ENST00000608029 497 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC125238.2-201ENST00000430003 1440 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 FANCD2P2-201ENST00000437591 1400 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AL353743.3-201ENST00000442109 1468 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC012321.1-201ENST00000561622 1588 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 CDY11P-201ENST00000447168 1651 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 WDR95P-201ENST00000425638 1542 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC008432.1-201ENST00000615912 1320 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 SNORD35A-201ENST00000363389 86 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 RNU5B-4P-201ENST00000363508 111 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 RNU6-1251P-201ENST00000364502 107 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AL121977.1-201ENST00000401636 979 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 SNORA11B-201ENST00000408175 129 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 RN7SKP151-201ENST00000410230 316 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 RN7SKP281-201ENST00000410472 352 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 THEM7P-201ENST00000419556 672 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AL139184.1-202ENST00000422303 222 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 NANOGP5-201ENST00000424456 877 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC092648.1-201ENST00000425870 423 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 KCTD9P1-201ENST00000430462 1167 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 MTCO1P43-201ENST00000431831 488 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 FABP5P3-201ENST00000437960 408 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 RPL6P30-201ENST00000443382 862 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 MTND2P22-201ENST00000444325 1033 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 Z83846.1-201ENST00000446798 265 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC093166.2-201ENST00000455969 1017 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 CBX1P5-201ENST00000475330 559 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 RPL37P23-201ENST00000492641 294 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 ASNSP4-201ENST00000511103 447 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC108103.1-201ENST00000511286 446 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 MAST4-IT1-201ENST00000514241 658 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AP001000.1-201ENST00000526843 742 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 MTATP6P15-201ENST00000527233 835 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 MIR212-201ENST00000586026 110 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 SNX6P1-201ENST00000601728 1224 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AP001267.4-201ENST00000602598 545 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms