Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 PPIAP13-201ENST00000434706 478 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AL117351.1-201ENST00000438864 766 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AL591503.2-201ENST00000442314 1005 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 DNAJB5P1-201ENST00000454004 806 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 RN7SL372P-201ENST00000461982 298 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 MTND3P7-201ENST00000474435 343 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 RN7SL797P-201ENST00000486314 297 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC109471.1-201ENST00000511631 612 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 HNRNPKP5-201ENST00000515300 253 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 GLYATL1P4-201ENST00000529326 906 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 SULT1C2P2-201ENST00000562517 294 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC097505.1-201ENST00000610199 565 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC234782.5-201ENST00000617723 324 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC095038.1-201ENST00000429248 1591 ntBASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
TRAIPQ9BWF2 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
TRAIPQ9BWF2 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.77□□□□□ -1.16
TRAIPQ9BWF2 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
TRAIPQ9BWF2 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 RNA5SP472-201ENST00000363868 119 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 FAM204BP-201ENST00000369171 701 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 RNU6-253P-201ENST00000384730 105 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC016907.1-201ENST00000419483 435 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 UQCRHP1-204ENST00000424609 274 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AL589794.1-201ENST00000424971 390 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 CHCHD3P1-201ENST00000425516 676 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC118469.1-201ENST00000442943 488 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 EEF1B2P5-201ENST00000444820 548 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 RPS27AP15-201ENST00000447672 466 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC009961.3-201ENST00000449832 765 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 GOT2P2-201ENST00000450663 1251 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AP001207.1-201ENST00000524051 481 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 EIF4A3P1-201ENST00000578499 647 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 OR2AS2P-201ENST00000606902 342 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 HTR1DP1-201ENST00000616500 888 ntBASIC7.77□□□□□ -1.17
TRAIPQ9BWF2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms