Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.96□□□□□ -1.14
SIN3AQ96ST3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.96□□□□□ -1.14
SIN3AQ96ST3 AP004607.2-201ENST00000533949 322 ntBASIC7.96□□□□□ -1.14
SIN3AQ96ST3 AC084824.2-201ENST00000548906 345 ntBASIC7.96□□□□□ -1.14
SIN3AQ96ST3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.96□□□□□ -1.14
SIN3AQ96ST3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.96□□□□□ -1.14
SIN3AQ96ST3 AC073869.8-201ENST00000641806 335 ntBASIC7.96□□□□□ -1.14
SIN3AQ96ST3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC7.96□□□□□ -1.14
SIN3AQ96ST3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SIN3AQ96ST3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SIN3AQ96ST3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC7.96□□□□□ -1.14
SIN3AQ96ST3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SIN3AQ96ST3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
SIN3AQ96ST3 LINC01963-201ENST00000562038 3148 ntBASIC7.96□□□□□ -1.14
SIN3AQ96ST3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
SIN3AQ96ST3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 MIR133B-201ENST00000362210 119 ntBASIC7.95□□□□□ -1.14
SIN3AQ96ST3 RNU1-77P-201ENST00000390868 162 ntBASIC7.95□□□□□ -1.14
SIN3AQ96ST3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 AC079064.1-201ENST00000528365 362 ntBASIC7.95□□□□□ -1.14
SIN3AQ96ST3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 RBM22P1-201ENST00000578589 1214 ntBASIC7.95□□□□□ -1.14
SIN3AQ96ST3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 AL049767.1-202ENST00000637826 242 ntBASIC7.95□□□□□ -1.14
SIN3AQ96ST3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.95□□□□□ -1.14
SIN3AQ96ST3 AC239868.2-201ENST00000564237 4527 ntBASIC7.95□□□□□ -1.14
SIN3AQ96ST3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 AL355488.2-201ENST00000609909 2850 ntBASIC7.94□□□□□ -1.14
SIN3AQ96ST3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 RNU4-2-201ENST00000365668 141 ntBASIC7.94□□□□□ -1.14
SIN3AQ96ST3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 AL133388.1-201ENST00000404509 287 ntBASIC7.94□□□□□ -1.14
SIN3AQ96ST3 AL121776.1-201ENST00000429337 372 ntBASIC7.94□□□□□ -1.14
SIN3AQ96ST3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 AC100832.1-201ENST00000471945 383 ntBASIC7.94□□□□□ -1.14
SIN3AQ96ST3 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 BLZF2P-201ENST00000553776 1130 ntBASIC7.94□□□□□ -1.14
SIN3AQ96ST3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 MIR6886-201ENST00000619864 61 ntBASIC7.94□□□□□ -1.14
SIN3AQ96ST3 AC016542.2-201ENST00000624201 619 ntBASIC7.94□□□□□ -1.14
SIN3AQ96ST3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SIN3AQ96ST3 AC089998.1-201ENST00000548575 3141 ntBASIC7.94□□□□□ -1.14
SIN3AQ96ST3 MSL3P1-202ENST00000440028 1468 ntBASIC7.94□□□□□ -1.14
SIN3AQ96ST3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 RNA5SP335-201ENST00000363817 110 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 U3.28-201ENST00000391249 210 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 AL136038.1-201ENST00000497246 351 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 AC130364.2-201ENST00000528639 604 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 OR4A43P-201ENST00000532938 908 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 MIR4489-201ENST00000578869 62 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 H3F3BP2-201ENST00000583907 357 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 AC005840.5-201ENST00000619166 599 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.93□□□□□ -1.14
SIN3AQ96ST3 MIR8080-201ENST00000622224 89 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 AC136428.4-201ENST00000634254 1155 ntBASIC7.93□□□□□ -1.14
SIN3AQ96ST3 AC100757.1-201ENST00000616872 1835 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms