Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 SEPT7P8-201ENST00000413308 775 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 OSTCP4-201ENST00000424397 449 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 ARL5AP3-201ENST00000439327 386 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 OR13K1P-201ENST00000444577 975 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 AL606517.1-201ENST00000446914 387 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 MTND2P6-201ENST00000455337 1030 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 RN7SL643P-201ENST00000471845 291 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 AL355032.1-201ENST00000472981 438 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC105918.1-201ENST00000474399 838 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC022336.1-201ENST00000475510 337 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC022206.1-201ENST00000495947 347 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 MTCO1P31-201ENST00000506355 492 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 RNU6-334P-201ENST00000517072 102 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 OR4A40P-201ENST00000533878 948 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC009729.1-201ENST00000548873 1133 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AL135999.3-201ENST00000610501 812 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 MIR6778-201ENST00000617912 73 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC007683.2-201ENST00000624681 714 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AC073488.9-201ENST00000631601 754 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 OR4G3P-201ENST00000633500 913 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 AL445984.1-201ENST00000637834 659 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AL359976.1-201ENST00000418655 3528 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS50Q96JG6 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS50Q96JG6 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC010266.2-201ENST00000564741 3255 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 CASC19-246ENST00000641625 1606 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS50Q96JG6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS50Q96JG6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS50Q96JG6 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC092111.2-201ENST00000611627 1414 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS50Q96JG6 MIR365B-201ENST00000362317 111 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 RNU6-792P-201ENST00000363490 107 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 MIR122-201ENST00000385044 85 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 ATP5F1P6-201ENST00000402768 767 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 RNA5SP198-201ENST00000410376 127 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 U3.43-201ENST00000410734 213 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 UBE2V1P14-201ENST00000415815 558 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC108479.1-201ENST00000431142 427 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC079922.1-201ENST00000443291 359 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 RPL5P7-201ENST00000444235 813 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AL022237.1-201ENST00000446663 358 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 COX4I1P2-201ENST00000447446 547 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AL022319.1-201ENST00000458183 1167 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 RN7SL221P-201ENST00000466190 281 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC108729.1-201ENST00000487812 947 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 GM2AP2-201ENST00000491764 562 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 RPL5P14-201ENST00000494197 878 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.03□□□□□ -1.44
VPS50Q96JG6 AC018797.1-201ENST00000510791 255 ntBASIC6.03□□□□□ -1.44
VPS50Q96JG6 ASNSP4-201ENST00000511103 447 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms