Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 MTND5P23-201ENST00000430812 1655 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 GNL2P1-201ENST00000451274 2190 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC008627.1-201ENST00000517511 1704 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 RNU1-65P-201ENST00000363919 148 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 RNU1-59P-201ENST00000364829 162 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC097463.1-201ENST00000447288 481 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC018635.1-201ENST00000468292 1030 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC078857.1-201ENST00000469870 667 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AL158068.1-201ENST00000506116 616 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AP001804.2-201ENST00000533932 910 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 U1.25-201ENST00000614085 162 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 U1.31-201ENST00000620022 160 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC073592.6-201ENST00000624271 415 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AL357562.1-201ENST00000624911 609 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 AC073488.3-201ENST00000631611 778 ntBASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CDK5RAP3Q96JB5 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 SNORA51.9-201ENST00000384295 124 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 ZNF965P-201ENST00000432501 817 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 ELOCP3-201ENST00000439303 348 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AL513321.1-201ENST00000441175 761 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 XKRY2-201ENST00000442362 1093 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 FCF1P6-201ENST00000456841 595 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AC108751.3-201ENST00000461814 1020 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 CABYRP1-201ENST00000465493 1045 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AC092865.4-201ENST00000477936 615 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AC093663.2-201ENST00000484625 313 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 RNU6-1102P-201ENST00000516149 96 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 RNU6-415P-201ENST00000516252 97 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 RN7SKP35-201ENST00000517210 151 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 ZNF92P2-201ENST00000600543 1059 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AC009779.8-202ENST00000607990 932 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AC092266.1-201ENST00000610958 165 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 CR589904.2-201ENST00000612533 440 ntBASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDK5RAP3Q96JB5 AC083837.1-201ENST00000565297 2994 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms