Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 HMGN1P17-201ENST00000513734 295 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 Y_RNA.710-201ENST00000516975 110 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.93□□□□□ -1.3
ERCC4Q92889 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.93□□□□□ -1.3
ERCC4Q92889 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.93□□□□□ -1.3
ERCC4Q92889 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.93□□□□□ -1.3
ERCC4Q92889 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.93□□□□□ -1.3
ERCC4Q92889 GLRXP2-201ENST00000555594 321 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 AC092868.3-201ENST00000560515 784 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.93□□□□□ -1.3
ERCC4Q92889 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
ERCC4Q92889 MIR4509-3-201ENST00000578671 94 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 RN7SL66P-201ENST00000582099 264 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC6.93□□□□□ -1.3
ERCC4Q92889 MIR4509-2-201ENST00000583920 94 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.93□□□□□ -1.3
ERCC4Q92889 MIR6885-201ENST00000612241 66 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 MIR4509-1-201ENST00000618224 94 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 AC211486.4-201ENST00000621495 113 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 CLUHP10-201ENST00000631979 980 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.93□□□□□ -1.3
ERCC4Q92889 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.93□□□□□ -1.3
ERCC4Q92889 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
ERCC4Q92889 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC4Q92889 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
ERCC4Q92889 EIF3EP1-201ENST00000433978 1316 ntBASIC6.93□□□□□ -1.3
ERCC4Q92889 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC4Q92889 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC4Q92889 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC4Q92889 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ERCC4Q92889 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC4Q92889 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC4Q92889 NLRP3P1-201ENST00000622303 1785 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.92□□□□□ -1.3
ERCC4Q92889 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
ERCC4Q92889 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC4Q92889 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
ERCC4Q92889 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.92□□□□□ -1.3
ERCC4Q92889 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.92□□□□□ -1.3
ERCC4Q92889 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
ERCC4Q92889 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.92□□□□□ -1.3
ERCC4Q92889 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
ERCC4Q92889 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC4Q92889 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC4Q92889 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC4Q92889 RNA5SP375-201ENST00000362975 119 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 RNU1-49P-201ENST00000363468 159 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 RNA5SP77-201ENST00000365394 120 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 GNG5P2-201ENST00000372054 207 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC4Q92889 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ERCC4Q92889 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.92□□□□□ -1.3
ERCC4Q92889 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC4Q92889 MRPS21P2-201ENST00000424704 264 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC4Q92889 RPEP4-201ENST00000437636 602 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 ARMC4P1-201ENST00000438905 707 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AL390879.1-201ENST00000439143 386 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 RPL31P20-201ENST00000449593 360 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AL445991.1-201ENST00000450381 475 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AL034369.1-201ENST00000453808 477 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AC069277.2-201ENST00000454211 432 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 RN7SL39P-201ENST00000462264 297 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 RN7SL643P-201ENST00000471845 291 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AC005412.2-201ENST00000492004 341 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AC090058.1-201ENST00000498788 435 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AC020699.1-201ENST00000505161 445 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.92□□□□□ -1.3
ERCC4Q92889 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.92□□□□□ -1.3
ERCC4Q92889 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.92□□□□□ -1.3
ERCC4Q92889 HMGB1P47-201ENST00000511281 589 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AC010376.1-201ENST00000522101 334 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC4Q92889 OR4V1P-201ENST00000525394 1140 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 MTND2P17-201ENST00000550281 688 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC4Q92889 AC011492.1-201ENST00000600023 315 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AP001267.4-201ENST00000602598 545 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.92□□□□□ -1.3
ERCC4Q92889 AC069234.4-201ENST00000621276 412 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AC022079.1-201ENST00000621546 602 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 MIR6813-201ENST00000621638 56 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 MIR6503-201ENST00000622884 86 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 AC093875.1-201ENST00000623688 504 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.92□□□□□ -1.3
ERCC4Q92889 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.92□□□□□ -1.3
ERCC4Q92889 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC4Q92889 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC4Q92889 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC4Q92889 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.92□□□□□ -1.3
ERCC4Q92889 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC4Q92889 AC119674.1-202ENST00000641333 1860 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC4Q92889 AC232271.1-201ENST00000602455 2715 ntBASIC6.92□□□□□ -1.3
ERCC4Q92889 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ERCC4Q92889 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC4Q92889 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms