Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CCDC112Q8NEF3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AC112198.2-201ENST00000426589 6996 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AC006484.1-201ENST00000435086 1884 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AC005261.6-201ENST00000623072 1387 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 SELENOWP1-201ENST00000322792 252 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 RNU1-134P-201ENST00000362935 165 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 RNA5SP435-201ENST00000364044 108 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 RN7SKP15-201ENST00000364742 309 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 KIF4CP-201ENST00000422742 1279 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AC115283.1-201ENST00000427353 400 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 OR52I1-201ENST00000450052 1050 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 RPS23P2-201ENST00000463671 415 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AC012123.2-201ENST00000485809 248 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 SNX18P25-201ENST00000510539 758 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 IGLV3-24-201ENST00000517477 197 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 FTH1P11-201ENST00000517577 551 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 HMGN2P47-201ENST00000559378 272 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AL356608.1-201ENST00000610034 820 ntBASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC112Q8NEF3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
CCDC112Q8NEF3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC112Q8NEF3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.21□□□□□ -1.41
CCDC112Q8NEF3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 RNA5SP326-201ENST00000363209 110 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 DEFA9P-201ENST00000433042 285 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 AC073465.2-201ENST00000440938 498 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 EIF5AP4-201ENST00000441206 465 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 BMS1P10-201ENST00000443754 1120 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 TAAR4P-201ENST00000454843 1039 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 RN7SL188P-201ENST00000469842 285 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 AC069304.1-201ENST00000491593 704 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 USP9YP2-201ENST00000504503 1000 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 USP9YP1-201ENST00000513521 1002 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 OR5D2P-201ENST00000524390 911 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 RPSAP75-201ENST00000605848 301 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 AL021918.2-201ENST00000613415 194 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 THAP12P5-201ENST00000405864 2275 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 AC104966.1-201ENST00000467010 1464 ntBASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC112Q8NEF3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 MRRFP1-201ENST00000435941 1675 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 OR9K1P-201ENST00000326513 941 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 MIR130A-201ENST00000385274 89 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 GCNT1P4-201ENST00000404096 329 ntBASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC112Q8NEF3 RPL35AP3-201ENST00000414680 288 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms