Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 OR7E116P-201ENST00000448529 957 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AL035690.1-201ENST00000490892 383 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 RN7SL808P-201ENST00000496066 299 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC026407.1-201ENST00000518369 204 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 CDC42P3-201ENST00000518493 633 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE4Q8N205 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC063944.3-201ENST00000609969 533 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 RPSAP73-201ENST00000614820 330 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 AL355974.3-201ENST00000617383 467 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 AL390318.1-201ENST00000624564 687 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC136428.4-201ENST00000634254 1155 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE4Q8N205 FBXL21-201ENST00000297158 1305 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE4Q8N205 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SYNE4Q8N205 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SYNE4Q8N205 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 RPL37P18-201ENST00000411602 243 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 RPA2P2-201ENST00000419698 796 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC016027.5-201ENST00000427227 210 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 RPL21P133-201ENST00000443666 476 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 AL450996.1-201ENST00000445574 1202 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 RN7SL172P-201ENST00000460535 303 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 FTH1P2-201ENST00000466086 412 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC087672.1-201ENST00000479876 766 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC096754.1-201ENST00000508904 818 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 CDH12P4-201ENST00000517835 295 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 CDH12P3-201ENST00000517935 295 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 CDH12P1-201ENST00000518435 295 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 MRPS21P7-201ENST00000566937 238 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 Mico1.1-201ENST00000611698 204 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 AL391597.1-201ENST00000618707 694 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC008993.2-201ENST00000631744 806 ntBASIC7.16□□□□□ -1.26
SYNE4Q8N205 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SYNE4Q8N205 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SYNE4Q8N205 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SYNE4Q8N205 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SYNE4Q8N205 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SYNE4Q8N205 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
SYNE4Q8N205 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
SYNE4Q8N205 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE4Q8N205 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE4Q8N205 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE4Q8N205 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE4Q8N205 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE4Q8N205 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE4Q8N205 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE4Q8N205 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE4Q8N205 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 MTATP6P31-201ENST00000406985 692 ntBASIC7.15□□□□□ -1.26
SYNE4Q8N205 RPL23AP27-201ENST00000415161 451 ntBASIC7.15□□□□□ -1.26
SYNE4Q8N205 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 LDHBP2-201ENST00000456969 1005 ntBASIC7.15□□□□□ -1.26
SYNE4Q8N205 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE4Q8N205 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 NRBF2P4-201ENST00000520874 850 ntBASIC7.15□□□□□ -1.26
SYNE4Q8N205 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms