Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC092960.1-201ENST00000604762 351 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC122710.3-201ENST00000606566 541 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AL133215.3-201ENST00000609801 448 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC106028.5-201ENST00000610332 395 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AL590282.1-201ENST00000610379 1136 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 MIR6813-201ENST00000621638 56 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC073862.4-201ENST00000622982 854 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC116563.2-201ENST00000624751 535 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC134503.1-201ENST00000633048 54 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC127024.8-201ENST00000623719 2094 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AL353898.3-201ENST00000624679 1755 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 XRCC6P2-201ENST00000457831 1822 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 SNORD81.2-201ENST00000365153 76 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AL391422.1-201ENST00000402155 436 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AL356432.1-201ENST00000405809 419 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 MIR1284-201ENST00000408337 120 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 RN7SKP56-201ENST00000410513 331 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AL157698.1-201ENST00000415190 1011 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC104843.2-201ENST00000427666 297 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AL512593.1-201ENST00000444758 779 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC092570.2-201ENST00000452117 1143 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC092757.1-201ENST00000467293 467 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC007547.2-201ENST00000468802 360 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC009153.1-201ENST00000485799 496 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 RPL23AP80-201ENST00000495605 424 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 NPY6R-201ENST00000503807 1112 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC091133.4-201ENST00000511142 308 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 SCARNA11.1-201ENST00000516918 132 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AP006587.5-201ENST00000532033 739 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 OR4K7P-201ENST00000580232 945 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AL035413.2-201ENST00000604801 525 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 AL592494.3-201ENST00000609485 464 ntBASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS3Q8IXF0 ZNF37BP-203ENST00000452306 1352 ntBASIC7.71□□□□□ -1.17
NPAS3Q8IXF0 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NPAS3Q8IXF0 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NPAS3Q8IXF0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.71□□□□□ -1.17
NPAS3Q8IXF0 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.71□□□□□ -1.17
NPAS3Q8IXF0 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 Y_RNA.86-201ENST00000363020 111 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 SNORD56.4-201ENST00000363883 71 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 MIR559-201ENST00000385188 96 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC007066.1-201ENST00000392902 381 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 TAF9BP1-201ENST00000396646 746 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AL022324.2-201ENST00000434827 780 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC236972.2-201ENST00000434979 310 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC097527.1-201ENST00000437031 530 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms