Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AL358178.1-201ENST00000407698 397 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 NENFP1-201ENST00000419476 466 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 BX323845.3-201ENST00000428215 527 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 HSPE1P27-201ENST00000430808 296 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AC138761.5-201ENST00000433967 325 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 MTND2P40-201ENST00000436718 841 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AL512637.1-201ENST00000439523 1231 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 RPSAP37-201ENST00000470913 821 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 RPL37P23-201ENST00000492641 294 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 RPS17P5-201ENST00000498293 408 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AC060775.1-201ENST00000518241 520 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AL359219.2-201ENST00000555184 348 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AC063977.5-201ENST00000601044 974 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 HSPD1P7-201ENST00000447985 1686 ntBASIC4.99□□□□□ -1.61
HIST2H3AQ71DI3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC099654.3-201ENST00000447087 1546 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 HSPA8P14-201ENST00000552265 1805 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 RNA5SP433-201ENST00000364491 114 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC005042.1-201ENST00000393397 800 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC096921.1-201ENST00000411661 375 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC079809.1-201ENST00000415468 276 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC066692.1-201ENST00000421721 457 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 RPS3AP15-201ENST00000483874 781 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 RPL32P33-201ENST00000487023 394 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 NENFP3-201ENST00000503735 313 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 SCARNA6.1-201ENST00000516989 238 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 FAM27E4-201ENST00000605259 342 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AC108865.2-201ENST00000606881 432 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 FO681491.1-202ENST00000623392 737 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 LINC01963-201ENST00000562038 3148 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 MAPK10-328ENST00000641553 4009 ntBASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST2H3AQ71DI3 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.97□□□□□ -1.61
HIST2H3AQ71DI3 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.97□□□□□ -1.61
HIST2H3AQ71DI3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HIST2H3AQ71DI3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms