Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 OR5AM1P-201ENST00000532136 1032 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AC095055.1-201ENST00000603472 1113 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AC068769.1-201ENST00000474767 2426 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AC010329.1-201ENST00000593903 8328 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 RNU4-4P-201ENST00000364588 130 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 RN7SKP126-201ENST00000411143 300 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AC096921.1-201ENST00000411661 375 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 RPL23AP18-201ENST00000416139 468 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AL451063.1-201ENST00000450164 1133 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 OR5AZ1P-201ENST00000527448 943 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AP000769.2-201ENST00000602344 396 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 FAM25E-202ENST00000608562 189 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 ZNF812P-201ENST00000457674 1694 ntBASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.19□□□□□ -1.1
CCDC141Q6ZP82 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 RNU6ATAC21P-201ENST00000408656 126 ntBASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 DNAJB5P1-201ENST00000454004 806 ntBASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 AC108161.1-201ENST00000461060 402 ntBASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 AC092490.3-201ENST00000545370 572 ntBASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 AP005403.1-201ENST00000579720 229 ntBASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 AC060766.1-201ENST00000590824 627 ntBASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 PACRG-210ENST00000611387 279 ntTSL 5 BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CCDC141Q6ZP82 Z82209.2-201ENST00000623410 2012 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 PANDAR-201ENST00000629595 1506 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 RNU1-59P-201ENST00000364829 162 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 AC009784.1-201ENST00000426484 460 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 IGLV2-34-201ENST00000490007 283 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 RNA5SP373-201ENST00000517271 95 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 HNRNPCP1-201ENST00000556181 766 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 U1.25-201ENST00000614085 162 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 U1.34-201ENST00000618578 162 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 U1.31-201ENST00000620022 160 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 AC091953.3-201ENST00000623220 236 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC141Q6ZP82 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC141Q6ZP82 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC141Q6ZP82 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC141Q6ZP82 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC141Q6ZP82 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC141Q6ZP82 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC141Q6ZP82 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms