Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MIR105-1-201ENST00000385222 81 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 FAR2P2-201ENST00000413041 594 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 RIMKLBP2-201ENST00000424737 654 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 FAR2P4-202ENST00000425399 584 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 RPS29P22-201ENST00000472363 168 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 DUBR-205ENST00000495228 411 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 AC109464.1-201ENST00000511091 819 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 snoU109.5-201ENST00000516231 132 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 YWHABP2-201ENST00000540201 713 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 GSTP1P1-201ENST00000548078 319 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 AL133406.3-201ENST00000606817 541 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 AC015660.5-201ENST00000623238 564 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 MIR141-201ENST00000384975 95 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 AC013442.1-201ENST00000397347 228 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42BPAQ5VT25 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 AC005225.5-201ENST00000623547 2225 ntBASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 U3.3-201ENST00000362986 216 ntBASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 AC008897.1-201ENST00000494006 347 ntBASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 AC009237.13-201ENST00000603193 276 ntBASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 DPY19L2P2-203ENST00000435536 1858 ntBASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 SPATA31C1-201ENST00000420021 3895 ntBASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.16□□□□□ -1.1
CDC42BPAQ5VT25 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 TEX41-205ENST00000431734 529 ntTSL 4 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 AC122688.1-201ENST00000541494 223 ntBASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 AC074101.1-201ENST00000637861 241 ntBASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CDC42BPAQ5VT25 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC8.15□□□□□ -1.11
CDC42BPAQ5VT25 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC8.15□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms