Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 AC007998.1-201ENST00000474156 672 ntBASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AC111000.5-201ENST00000506559 1178 ntBASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AC138866.2-201ENST00000508650 584 ntBASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 OR11H3P-201ENST00000554547 982 ntBASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 MRPS21P7-201ENST00000566937 238 ntBASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 CU639417.4-201ENST00000623928 207 ntBASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AC135068.5-201ENST00000624197 983 ntBASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AC073869.8-201ENST00000641806 335 ntBASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AC100757.1-201ENST00000616872 1835 ntBASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 AC109446.4-201ENST00000623235 2755 ntBASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO1Q2MKA7 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AC018628.1-201ENST00000624147 3819 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 RN7SKP6-201ENST00000364795 319 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 SNORA16A-201ENST00000384342 137 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 PPIAP9-201ENST00000403866 498 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 GABARAPL3-201ENST00000412799 354 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 RPL34P3-201ENST00000421454 338 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 MTND6P12-201ENST00000428247 522 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 FMO7P-201ENST00000436045 768 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 RPL23AP19-201ENST00000436229 369 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AC002504.1-201ENST00000438281 691 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 EEF1B2P6-201ENST00000445713 673 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 RN7SL72P-201ENST00000460697 269 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 SCARNA20.4-201ENST00000516969 131 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AP004609.2-201ENST00000532177 190 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 NPM1P5-201ENST00000557228 838 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AP005403.1-201ENST00000579720 229 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AC010632.3-201ENST00000611377 369 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AC008115.3-201ENST00000614874 549 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AL031658.2-201ENST00000616850 651 ntBASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO1Q2MKA7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO1Q2MKA7 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO1Q2MKA7 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO1Q2MKA7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO1Q2MKA7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO1Q2MKA7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms