Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
SCN1BQ07699 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SCN1BQ07699 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN1BQ07699 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN1BQ07699 RNA5SP85-201ENST00000365378 119 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SCN1BQ07699 RNA5SP431-201ENST00000410312 120 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN1BQ07699 UBTFL2-201ENST00000411859 1191 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.28□□□□□ -1.56
SCN1BQ07699 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN1BQ07699 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN1BQ07699 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN1BQ07699 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN1BQ07699 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN1BQ07699 RPEP4-201ENST00000437636 602 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC245517.2-201ENST00000442890 346 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 AC092601.1-201ENST00000444526 383 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN1BQ07699 GAPDHP14-201ENST00000450472 937 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 RN7SL39P-201ENST00000462264 297 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN1BQ07699 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
SCN1BQ07699 RPL23AP40-201ENST00000487630 390 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 GM2AP2-201ENST00000491764 562 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC108157.1-201ENST00000510511 539 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN1BQ07699 RNU2-45P-201ENST00000516068 187 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 CASP1P2-201ENST00000526830 1258 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC012467.1-201ENST00000607740 256 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.28□□□□□ -1.56
SCN1BQ07699 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC079298.2-201ENST00000623885 459 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 AL118508.4-201ENST00000624142 1176 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
SCN1BQ07699 AC093775.1-201ENST00000624154 1868 ntBASIC5.28□□□□□ -1.56
SCN1BQ07699 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SCN1BQ07699 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN1BQ07699 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN1BQ07699 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN1BQ07699 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 SPATA2P1-201ENST00000431223 2055 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 AC010266.2-201ENST00000564741 3255 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SCN1BQ07699 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SCN1BQ07699 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SCN1BQ07699 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN1BQ07699 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN1BQ07699 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SCN1BQ07699 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN1BQ07699 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.27□□□□□ -1.57
SCN1BQ07699 RPS10P18-201ENST00000442662 495 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 AL031681.1-201ENST00000443304 400 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN1BQ07699 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.27□□□□□ -1.57
SCN1BQ07699 RN7SL369P-201ENST00000477138 299 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 HAUS1P1-201ENST00000505275 832 ntBASIC5.27□□□□□ -1.57
SCN1BQ07699 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms