Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 DNAJA1P6-201ENST00000437347 354 ntBASIC5.39□□□□□ -1.55
CACNA1BQ00975 AC091167.1-201ENST00000492017 396 ntBASIC5.39□□□□□ -1.55
CACNA1BQ00975 AC084824.1-201ENST00000550917 1005 ntBASIC5.39□□□□□ -1.55
CACNA1BQ00975 AC027807.1-201ENST00000559921 996 ntBASIC5.39□□□□□ -1.55
CACNA1BQ00975 VN1R85P-201ENST00000601587 426 ntBASIC5.39□□□□□ -1.55
CACNA1BQ00975 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CACNA1BQ00975 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CACNA1BQ00975 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CACNA1BQ00975 Z95331.1-201ENST00000623075 23112 ntBASIC5.38□□□□□ -1.55
CACNA1BQ00975 AL359922.2-201ENST00000581788 3017 ntBASIC5.38□□□□□ -1.55
CACNA1BQ00975 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CACNA1BQ00975 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CACNA1BQ00975 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CACNA1BQ00975 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CACNA1BQ00975 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CACNA1BQ00975 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 TRY2P-201ENST00000448860 689 ntBASIC5.38□□□□□ -1.55
CACNA1BQ00975 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 RN7SL51P-201ENST00000468230 285 ntBASIC5.38□□□□□ -1.55
CACNA1BQ00975 RPL7L1P8-201ENST00000469911 741 ntBASIC5.38□□□□□ -1.55
CACNA1BQ00975 RPSAP51-201ENST00000497462 645 ntBASIC5.38□□□□□ -1.55
CACNA1BQ00975 OR4A6P-201ENST00000534364 970 ntBASIC5.38□□□□□ -1.55
CACNA1BQ00975 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 AL391358.1-201ENST00000605342 190 ntBASIC5.38□□□□□ -1.55
CACNA1BQ00975 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 AC131009.3-201ENST00000621809 287 ntBASIC5.38□□□□□ -1.55
CACNA1BQ00975 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CACNA1BQ00975 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CACNA1BQ00975 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.38□□□□□ -1.55
CACNA1BQ00975 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 AL133243.4-201ENST00000623116 3109 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 FAM3C2-201ENST00000312214 681 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 AC073358.1-201ENST00000505671 684 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 OR8G5-201ENST00000524943 1041 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 AC137695.1-201ENST00000604126 489 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 AC145423.1-201ENST00000605712 336 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 PSMC1P2-201ENST00000423961 1204 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 RPL7P11-201ENST00000437586 658 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 CYCSP42-201ENST00000450823 238 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 AP000547.1-201ENST00000454360 617 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 RANP2-201ENST00000456833 229 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 EDDM3DP-201ENST00000554692 434 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 MIR6830-201ENST00000636015 70 ntBASIC5.37□□□□□ -1.55
CACNA1BQ00975 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC5.37□□□□□ -1.55
CACNA1BQ00975 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CACNA1BQ00975 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms