Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AL512652.1-201ENST00000619006 500 ntBASIC4.29□□□□□ -1.72
CCL20P78556 AL121985.3-201ENST00000620690 523 ntBASIC4.29□□□□□ -1.72
CCL20P78556 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.29□□□□□ -1.72
CCL20P78556 AC068213.1-201ENST00000625124 226 ntBASIC4.29□□□□□ -1.72
CCL20P78556 AC099654.6-201ENST00000636487 512 ntBASIC4.29□□□□□ -1.72
CCL20P78556 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 PSG10P-201ENST00000501199 1500 ntBASIC4.29□□□□□ -1.72
CCL20P78556 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.29□□□□□ -1.72
CCL20P78556 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 OR4G1P-202ENST00000641173 1788 ntBASIC4.29□□□□□ -1.72
CCL20P78556 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.29□□□□□ -1.72
CCL20P78556 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCL20P78556 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCL20P78556 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCL20P78556 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.28□□□□□ -1.72
CCL20P78556 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCL20P78556 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCL20P78556 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CCL20P78556 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.28□□□□□ -1.72
CCL20P78556 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCL20P78556 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCL20P78556 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.28□□□□□ -1.72
CCL20P78556 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 EI24P3-201ENST00000399046 1062 ntBASIC4.28□□□□□ -1.72
CCL20P78556 AL009179.1-201ENST00000406085 265 ntBASIC4.28□□□□□ -1.72
CCL20P78556 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.28□□□□□ -1.72
CCL20P78556 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.28□□□□□ -1.72
CCL20P78556 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.28□□□□□ -1.72
CCL20P78556 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.28□□□□□ -1.72
CCL20P78556 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.28□□□□□ -1.72
CCL20P78556 AC007679.3-201ENST00000434035 414 ntBASIC4.28□□□□□ -1.72
CCL20P78556 AL356133.1-201ENST00000444762 372 ntBASIC4.28□□□□□ -1.72
CCL20P78556 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.28□□□□□ -1.72
CCL20P78556 AL161722.1-201ENST00000446972 1032 ntBASIC4.28□□□□□ -1.72
CCL20P78556 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC4.28□□□□□ -1.72
CCL20P78556 BTF3P6-201ENST00000448054 499 ntBASIC4.28□□□□□ -1.72
CCL20P78556 AC093166.4-201ENST00000457867 318 ntBASIC4.28□□□□□ -1.72
CCL20P78556 RPL5P33-201ENST00000487833 905 ntBASIC4.28□□□□□ -1.72
CCL20P78556 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.28□□□□□ -1.72
CCL20P78556 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.28□□□□□ -1.72
CCL20P78556 AC089984.3-201ENST00000552838 363 ntBASIC4.28□□□□□ -1.72
CCL20P78556 CHEK2P2-201ENST00000554701 672 ntBASIC4.28□□□□□ -1.72
CCL20P78556 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC4.28□□□□□ -1.72
CCL20P78556 AL390726.5-202ENST00000564800 256 ntBASIC4.28□□□□□ -1.72
CCL20P78556 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.28□□□□□ -1.72
CCL20P78556 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.28□□□□□ -1.72
CCL20P78556 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 AP000769.2-201ENST00000602344 396 ntBASIC4.28□□□□□ -1.72
CCL20P78556 AC068768.2-201ENST00000602352 343 ntBASIC4.28□□□□□ -1.72
CCL20P78556 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.28□□□□□ -1.72
CCL20P78556 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.28□□□□□ -1.72
CCL20P78556 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.28□□□□□ -1.72
CCL20P78556 MIR6839-201ENST00000620425 113 ntBASIC4.28□□□□□ -1.72
CCL20P78556 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCL20P78556 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.73
CCL20P78556 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.27□□□□□ -1.73
CCL20P78556 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL20P78556 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL20P78556 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCL20P78556 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.27□□□□□ -1.73
CCL20P78556 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCL20P78556 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCL20P78556 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CCL20P78556 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCL20P78556 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CCL20P78556 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.27□□□□□ -1.73
CCL20P78556 AC005522.1-201ENST00000395416 346 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AL096711.1-201ENST00000404780 554 ntBASIC4.27□□□□□ -1.73
CCL20P78556 RNA5SP487-201ENST00000410186 122 ntBASIC4.27□□□□□ -1.73
CCL20P78556 RN7SKP108-201ENST00000411367 328 ntBASIC4.27□□□□□ -1.73
CCL20P78556 UBTFL2-201ENST00000411859 1191 ntBASIC4.27□□□□□ -1.73
CCL20P78556 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.27□□□□□ -1.73
CCL20P78556 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCL20P78556 AL161742.1-201ENST00000418154 584 ntBASIC4.27□□□□□ -1.73
CCL20P78556 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCL20P78556 AC023141.3-201ENST00000436698 278 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.27□□□□□ -1.73
CCL20P78556 PCMTD1P3-201ENST00000451824 472 ntBASIC4.27□□□□□ -1.73
CCL20P78556 AC090589.1-201ENST00000473109 362 ntBASIC4.27□□□□□ -1.73
CCL20P78556 RN7SL570P-201ENST00000484405 292 ntBASIC4.27□□□□□ -1.73
CCL20P78556 RN7SL346P-201ENST00000491561 294 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms